Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity

ABSTRACT: This SuperSeries is composed of the SubSeries listed below.

OTHER RELATED OMICS DATASETS IN: PXD008971

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE109151 | GEO | 2019/01/22

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [ChIP-Seq]

Project description:During microbe-associated molecular pattern (MAMP)-triggered immunity (MTI) more than 5000 Arabidopsis genes are significantly altered in their expression and the question arises, how such an enormous reprogramming of the transcriptome can be regulated in a safe and robust manner? For the WRKY transcription factors, which are important regulators not only of this defense response, it appears that they act in a complex regulatory sub-network rather than in a linear fashion, which is much more vulnerable to gene function loss either by pathogen-derived effectors or by mutations. In this study we employed RNA-seq, mass spectrometry and ChIP-seq to find evidence for and uncover principles and characteristics of this network.

2019-01-22 | GSE109149 | GEO

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [RNA-Seq]

2019-01-22 | GSE109150 | GEO

WRKY transcription factors in early MAMP-triggered immunity

Project description:This SuperSeries is composed of the SubSeries listed below.

2017-01-04 | GSE85924 | GEO

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity

Project description:Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity

| PRJNA429780 | ENA

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [RNA-Seq]

Project description:Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [RNA-Seq]

| PRJNA429781 | ENA

Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [ChIP-Seq]

Project description:Principles and characteristics of the WRKY regulatory network of early MAMP-triggered immunity [ChIP-Seq]

| PRJNA429782 | ENA

WRKY transcription factors in early MAMP-triggered immunity (RNA-Seq)

Project description:We determined on a genome-wide scale the flg22-induced in vivo DNA-binding dynamics of three of the most prominent WRKY factors, WRKY18, WRKY40 and WRKY33. The three WRKY factors each bound to more than 1000 gene loci predominantly at W-box elements, the known WRKY binding motif. Transcriptional analysis also revealed that WRKY18 and WRKY40 function redundantly as negative regulators of flg22-induced genes.

2017-01-04 | GSE85923 | GEO

WRKY transcription factors in early MAMP-triggered immunity (ChIP-Seq)

2017-01-04 | GSE85922 | GEO

WRKY transcription factors in early MAMP-triggered immunity

Project description:WRKY transcription factors in early MAMP-triggered immunity

| PRJNA339761 | ENA

Active DNA demethylation regulates MAMP-triggered immunity in Arabidopsis

Project description:We found that active DNA demethylation is required for MAMP-triggered immunity to bacteria pathogen. Triple mutant plants deficient in ROS1, DML2, and DML3 (RDD) exhibited compromised immune responses such as induction of immune genes .

2022-06-20 | GSE156608 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data