Transcriptomics,Genomics

Dataset Information

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Analysis of long non-coding RNA and mRNA expression in bovine macrophages brings up novel aspects of Mycobacterium avium subspecies paratuberculosis infections


ABSTRACT: The alteration in genomic expression profiles of mRNA and long non-coding RNA (lncRNA) in bovine macrophages in response to Mycobacterium avium subspecies paratuberculosis (MAP) infection was investigated by applying an RNA-Seq based approach. A computational pipeline was implemented which identified more than 300 unannotated lncRNAs in macrophages of which 38 were differentially regulated by the infection. Overall design: Primary bovine macrophages were infected with MAP, total RNA was sequenced and analyzed in terms of mRNA and lncRNA expression

INSTRUMENT(S): Illumina HiSeq 4000 (Bos taurus)

SUBMITTER: Jennifer zur Brügge  

PROVIDER: GSE122933 | GEO | 2018-11-27

REPOSITORIES: GEO

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