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Evaluation of single cell classifiers for single cell RNA-seq datasets

ABSTRACT: Three human cell lines, K562, HEK293T and A431, and one murine cell line, L929, are mixed with equal proportion in two experiments. One mixture, named Mix3, consists of K562, HEK293T and L929. The other, named Mix4, consists of K562, HEK293T, A431 and L929. These cell lines were processed with the Singleron GEXSCOPETM protocol using GEXSCOPETM Single Cell RNA Library Kit (Singleron) and sequenced on an Illumina Xten. FASTQ data were preprocessed using fastp and STAR.

ORGANISM(S): Mus musculus Homo sapiens

PROVIDER: GSE128982 | GEO | 2019/11/27

REPOSITORIES: GEO

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