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Root transcriptome of the tsn1 tsn2 double mutant

ABSTRACT: au06-03_tsn_fj - tsn_fj - Root transcriptome of the tsn1 tsn2 double mutant - Comparison of a tsn1 tsn2 double mutant line (A10.9.3- or A13.3.11-) and an isogenic line complemented by TSN2 (A10.9.5) or TSN1 (A13.3.2) Keywords: gene knock in (transgenic),gene knock out

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE15559 | GEO | 2009/04/08

SECONDARY ACCESSION(S): PRJNA115649

REPOSITORIES: GEO

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Root transcriptome of the tsn1 tsn2 double mutant

Project description:au06-03_tsn_fj - tsn_fj - Root transcriptome of the tsn1 tsn2 double mutant - Comparison of a tsn1 tsn2 double mutant line (A10.9.3- or A13.3.11-) and an isogenic line complemented by TSN2 (A10.9.5) or TSN1 (A13.3.2) Keywords: gene knock in (transgenic),gene knock out 6 dye-swap - CATMA arrays

2009-04-08 | E-GEOD-15559 | biostudies-arrayexpress

Wild type vs glnPA double mutant

2008-02-01 | GSE9850 | GEO

Wild type vs glnPA double mutant

Project description:This microarray experiment is part of a study addressing the importance of glutamine metabolism in Streptococcus pneumoniae for the virulence of this bacterium. To be able to gain more insight into the phenotype of a double mutant of glnA (TIGR 4 locus tag SP0502, encoding glutamine synthetase) and glnP (SP1241, encoding a permease component of a glutmine uptake ABC transporter), the transcriptome of this mutant, the glnPA double mutant, was determined in strain S. pneumoniae D39 grown in rich GM17 medium with 0.5 mg/ml glutamine. This revealed a big change in transcriptome in the mutant, especially a lot of amino acid and peptide metabolic genes. Keywords: transcriptome analysis of D39 wild-type compared with its isogenic glnPA double mutant The wild-type strain D39 and its isogenic glnPA double mutant were grown in 4 biological replicates in GM17 with 0.5 mg/ml glutamine to an Optical Density at 600 nm of 0.3. From these cultures samples were prepared for transciptome determination with in-house printed microarrays covering the genomes of several S. pneumoniae species. The wild-type (control, Ch1) was labeled with Cy5 (3 samples) or Cy3 (1 sample) and vice versa for the samples of the glnPA mutant (target, Ch2). Samples were pair-wise compared on glass-microarray slides.

2010-05-26 | E-GEOD-9850 | biostudies-arrayexpress

The arf10/16 double mutant has a differential transcriptional program in response to Al stress

Project description:To reveal how ARF10 and ARF16 regulate Al-induced root-growth inhibition, a transcriptome analysis was carried out by comparing without and with Al-exposed arf10/16 double mutant line and WT through RNA sequencing. The present transcriptomic analysis has revealed that many of the differentially transcribed genes associated with cell wall modification were regulated by transcription factors ARF10 and ARF16. The implication is that the auxin-regulated Al-induced inhibition of root growth arises from auxin signalling-regulated cell wall structure or component modification.

2016-12-16 | GSE57487 | GEO

Comparison of simple mutants gcn5 and hd1 and double mutant gcn5 hd1.

Project description:rs05-09_histone-acetylase - gcn5 - Different genes show an opposed expression profile in gcn5 compared to hd1. For these genes, the double mutant might show an expression similar to the wild type. - gcn5, hd1 or double mutant gcn5hd1 were grown on MS during 10 days (1.03 boyes stage). Keywords: gene knock out

2009-04-11 | GSE15560 | GEO

AqpZ Single Mutant and Double Mutant Cycle Native MS

Project description:Native MS analysis of single mutant and double mutant cycle experiments. See: https://www.biorxiv.org/content/10.1101/2023.09.19.558516v1

2023-10-06 | MSV000093064 | MassIVE

pld-Fonctional analysis of the double mutant phospholipasezeta1,2 in response to abiotic stress

Project description:rs06-01_pld - pld - Role of PLDzeta to abiotic stress adaptation - A double mutant PLDzeta1,2 was obtained in a Columbia background. 12-day-old Arabidopsis seedlings, wt or double mutant, were treated with either NaCl (200 mM), mannitol (400 mM) or with 4degreeC temperature during 3 h. 3 biological replicates were pooled. Keywords: gene knock out,treated vs untreated comparison

2007-10-31 | GSE9459 | GEO

P. aeruginosa/S. aureus wt, fhuG mutant, fhuD1/D2 double mutant interaction

Project description:Manuscript Title: Pyochelin biotransformation shapes bacterial competition LC-MS/MS analysis of P. aeruginosa interaction with S. aureus wildtype, fhuG mutant and fhuD1/D2 double mutant.

2022-04-10 | MSV000089231 | MassIVE

Comparison of simple mutants gcn5 and hd1 and double mutant gcn5 hd1.

2009-04-10 | E-GEOD-15560 | biostudies-arrayexpress

Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24

Project description:Gene expression profiles of rescue with wild type or SUMO double mutant TRIM24 after shRNA mediated knockdown of TRIM24 in MCF7 cell line

2018-01-01 | GSE77140 | GEO

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