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Gene expression levels in immortalized B cells from members of 45 CEPH-Utah pedigrees

ABSTRACT: We used microarrays to examine gene expression levels from members of 45 CEPH-Utah pedigrees. Keywords: array-based gene expression

ORGANISM(S): Homo sapiens

PROVIDER: GSE16778 | GEO | 2010/09/21

SECONDARY ACCESSION(S): PRJNA117531

REPOSITORIES: GEO

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Gene expression levels in immortalized B cells from members of 45 CEPH-Utah pedigrees

Project description:We used microarrays to examine gene expression levels from members of 45 CEPH-Utah pedigrees. Keywords: array-based gene expression We measured gene expression levels in immortalized B cells from members of 45 CEPH-Utah pedigrees. For some cell lines, RNA extracts were hybridized twice, representing technical replicates. For these cell lines, we take the average signal intensity as a measure of relative abundance of a gene. These gene expression levels were then used in genome-wide linkage analyses to identify genetics determinants of gene expression. CEL files were lost for 3 Samples GSM420949, GSM421101, and GSM421103.

2010-09-21 | E-GEOD-16778 | biostudies-arrayexpress

Gene expression levels in immortalized B cells from 131 unrelated CEPH-Utah grandparents treated under ER stress.

Project description:We used microarrays to examine gene expression levels from 131 unrelated CEPH-Utah grandparents with either DMSO or tunicamycin.

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Gene expression levels in immortalized B cells from 95 unrelated CEPH-Utah individuals treated with 10Gy of ionizing radiation

Project description:We used microarrays to examine gene expression levels from 95 unrelated CEPH-Utah individuals 0, 2 or 6 hours after treatment with 10Gy of ionizing radiation.

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Transcription profiling of human irradiated immortalized B cells, lymphoblastoid cells (CEPH) exposed to 10 Gy of ionizing radiation

Project description:We used microarrays to measure the expression levels of genes in irradiated immortalized B cells, lymphoblastoid cells, from members of Centre dEtude du Polymorphisme Humain (CEPH) Utah pedigrees. Data were collected for cells at baseline and 2 hour and 6 hour after exposure to 10 Gy of ionizing radiation (IR). Experiment Overall Design: We used microarrays to measure the expression levels of genes in irradiated immortalized B cells, lymphoblastoid cells, from members of 15 Centre dEtude du Polymorphisme Humain (CEPH) Utah pedigrees (CEPH 1333, 1341, 1346, 1362, 1408, 1416, 1420, 1421, 1423, 1424, 1444, 1447, 1451, 1454, 1582). Expression data was obtained for cell lines derived from 2 parents and 8 children per each family. Cells were irradiated at 10 Gy in a 137Cs irradiator. Cells were harvested prior to radiation and at 2 and 6 hours following exposure to IR.

2009-04-10 | E-GEOD-12626 | biostudies-arrayexpress

Gene expression levels in immortalized B cells from 131 unrelated CEPH-Utah grandparents treated under ER stress.

Project description:We used microarrays to examine gene expression levels from 131 unrelated CEPH-Utah grandparents with either DMSO or tunicamycin. We measured gene expression levels in immortalized B cells from 131 unrelated CEPH-Utah grandparents. Each individual was treated for 8 hours with either DMSO or with 4 ug/ml of tunicamycin. Gene expression was measured.

2013-03-28 | E-GEOD-36911 | biostudies-arrayexpress

Gene expression levels in immortalized B cells from 95 unrelated CEPH-Utah individuals treated with 10Gy of ionizing radiation

Project description:We used microarrays to examine gene expression levels from 95 unrelated CEPH-Utah individuals 0, 2 or 6 hours after treatment with 10Gy of ionizing radiation. We measured gene expression levels in immortalized B cells from 95 unrelated CEPH-Utah individuals. Each individual was treated with 10Gy of ionizing radiation and expression was measured 0, 2 and 6 hour after treatment.

2013-03-28 | E-GEOD-36910 | biostudies-arrayexpress

Transcription profiling of human CEPH panel members to investigate natural variation in human gene expression

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Genetic variation in radiation-induced cell death

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2011-08-03 | E-GEOD-26835 | biostudies-arrayexpress

Homo sapiens strain:CEPH/UTAH Pedigree 1463

Project description:Homo sapiens CEPH/UTAH Pedigree 1463 genome sequencing project

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Homo sapiens strain:CEPH/UTAH PEDIGREE 1463

Project description:Homo sapiens CEPH/UTAH PEDIGREE 1463 Genome sequencing project

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