Transcriptomics

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Modulation of biological activities in adipose derived stem cells by histone deacetylation


ABSTRACT: Epigenetic mechanisms control stem cell homeostasis and differentiation as well as skin regeneration. In our study, we investigated the effects of Suberoylanilide hydroxamic acid (SAHA) on stem cells to understand the cellular and molecular impact. Adipose-derived stem cells received consecutive SAHA treatment for 72 hours. No change in the cell viability could be noticed at the studied concentrations. On the other hand, a decrease in the protein expression of histone deacetylases at 1000 nM was found. The cell proliferation marker (Ki-67) was increased after SAHA treatment compared to the vehicle as shown by immunofluorescence staining. The expression of CCND1 gene expression was upregulated, while the protein expression of the proliferating cell nuclear antigen was downregulated. Alternatively, microarray analysis revealed 74 up regulated and 40 downregulated differentially expressed genes and revealed that CDKN1A and MDM2 were upregulated under the influence of SAHA. On the other hand, the proteomics analysis identified 631 upregulated proteins while 823 proteins were downregulated in comparison to the vehicle. The pathway enrichment analysis showed that cell cycle, ATP-dependent chromatin remodeling and DNA are among the regulated pathways. This study suggested that SAHA as pharmaco-epigenetic agent might alter ADSCs determination through coordinated biological processes

ORGANISM(S): Homo sapiens

PROVIDER: GSE269774 | GEO | 2025/02/05

REPOSITORIES: GEO

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