Transcriptomics

Dataset Information

23

Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress


ABSTRACT: Alkalinity stress is considered to be one of the major stressors for fish in saline-alkali water. Thus, it is of great significance from both aquaculture and physiological viewpoint to understand the molecular genetic response of aquatic organisms to alkalinity stress. The objective of this study is to determine genome-wide gene expression profiles to better understand the physiology response of medaka (Oryzias latipes) to high carbonate alkalinity stress. In lab-based cultures, adult fish were exposed to freshwater and high carbonate alkalinity water .We designed a microarray containing 26429 oligonucleotides and describe our experimental results for measuring gene expression changes in the gill of carbonate alkalinity stress exposed fish. Overall design: The fish were exposed to freshwater (FW) and high carbonate alkalinity water (AW) for 96h, each with three replicates.

INSTRUMENT(S): Agilent-023673 ECSFRI medaka 4x44K

ORGANISM(S): Oryzias latipes  

SUBMITTER: Zongli Yao  

PROVIDER: GSE27298 | GEO |

SECONDARY ACCESSION(S): PRJNA137353

REPOSITORIES: GEO

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