Transcriptomics

Dataset Information

15

Response of rice seedlings to the allelochemical juglone


ABSTRACT: Juglone is phytotoxic and has been widely studied for allelopathic effects, but the molecular mode of action of allelochemicals is not well understood.To gain more insight into cellular responses to juglone, we have taken a large-scale analysis of the rice transcriptome during juglone stress. Exposure to juglone triggered changes in the transcript levels for several genes related to cell rescue and defense, with the majority of these genes potentially associated with chemical detoxification pathways, abiotic stress response pathway, cell wall formation and epigenetic mechanism. Molecular mechanisms for the allelochemical,juglone, in rice roots Overall design: Comparison of mock control and rice seedlings treated with 10mM juglone; Biological replicates: 3 control replicates, 3 juglone-treated replicates.

INSTRUMENT(S): Agilent-015241 Rice Gene Expression 4x44K Microarray (Probe name version)

ORGANISM(S): Oryza sativa  

SUBMITTER: Wen-Chang Chi   

PROVIDER: GSE27413 | GEO | 2011-08-17

SECONDARY ACCESSION(S): PRJNA137251

REPOSITORIES: GEO

altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets

2014-05-03 | E-GEOD-27413 | ArrayExpress
2014-05-03 | E-GEOD-33375 | ArrayExpress
2012-03-27 | E-GEOD-6901 | ArrayExpress
2014-06-02 | E-GEOD-41719 | ArrayExpress
2014-09-26 | E-GEOD-51151 | ArrayExpress
2012-05-31 | GSE19983 | GEO
2014-06-02 | E-GEOD-33376 | ArrayExpress
2016-06-20 | E-GEOD-80200 | ArrayExpress
2009-06-03 | GSE15448 | GEO
2011-06-10 | E-GEOD-15448 | ArrayExpress