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ScRNAseq timecourse from wildtype C. elegans larvae sampled from 18 to 24 hours at 25oC, with FACS sorting cells using ubiquitous markers.

ABSTRACT: We collected a timecourse scRNA-seq dataset from wildtype C. elegans larvae, using ubiquitous flurophores to FACS sort cells in order to collect as many tissues as possible. The data deposited were collected from one single experiment with pools A,B,C representing different 10X runs for a given sample. The overall goal of the experiment was to identify the tissues in which oscillating gene expression occurs, and to understand tissue-specific differences in oscillatory output. We were able to identify 18 different tissues, 7 of which show clear oscillatory expression patterns.

ORGANISM(S): Caenorhabditis elegans

PROVIDER: GSE288912 | GEO | 2025/09/17

REPOSITORIES: GEO

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