Transcriptomics

Dataset Information

Differentily expressed genes of homozygotes Cmnor; CmNOR/Cmnor heterozygotes and WT plants


ABSTRACT: Oriental melon, a climacteric fruit prized for its superior quality, faces limited shelf life. Although knockout NON-RIPENING (CmNOR) prolongs storage duration at the expense of quality loss, the potential of its direct agricultural application to reconcile this conflict remains uninvestigated. Through crossing homozygotes Cmnor and wild-type plants, we created CmNOR/Cmnor heterozygotes displaying 6-day delayed ripening and 3-5 day extended shelf life at 20°C storage while preserving fruit quality. Ethylene treatment accelerated softening but failed to restore quality parameters of heterozygotes and homozygotes. Transcriptomic analysis revealed homozygotes showed >10-fold expression variations versus WT in quality-associated genes (e.g., carotenoid biosynthesis), which diminished to ~2-fold differences in heterozygotes. Storage-phase differential genes clustered in water regulation and cell wall modification pathways, with heterozygous-WT expression disparities gradually decreasing over time. The CmNOR dosage effect dynamically modulates interconnected quality and preservation networks, proposing an editing-based solution to overcome the storability-quality dichotomy in climacteric fruits.

ORGANISM(S): Citrullus lanatus

PROVIDER: GSE296878 | GEO | 2026/03/12

REPOSITORIES: GEO

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