Transcriptomics

Dataset Information

0

Establishment and Characterization of Three Canine Ameloblastoma Cell Lines with Genomic and Transcriptomic profiles


ABSTRACT: Establishment of canine acanthomatous ameloblastoma (CAA) cell lines has profound importance in pre-clinical in vitro testing. The goal of this study was to develop, authenticate, and characterize three CAA cell lines. Cell lines were developed with standard cell culture techniques from dogs with naturally occurring CAA. Each cell line was authenticated as canine with a validated PCR panel. Epithelial cell origin was confirmed with pan-CK flow cytometry. Next generation DNA and RNA sequencing characterized features of the cell lines and compared them to the parent tumor. We confirmed that all cell lines maintained mutations seen in the parent tumors including a missense HRAS mutation and RTK-RAS pathway upregulation across all samples. Other common mutations (2/3 cell lines and their parent tumors) included ADGRA3, DNAH7, F10, KIAA1671, OGFR, SLC6A17, SNX7, SPTBN5, TENM4, and YEATS2.

ORGANISM(S): Canis lupus familiaris

PROVIDER: GSE326289 | GEO | 2026/07/02

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2021-09-15 | GSE175876 | GEO
2026-05-22 | GSE317244 | GEO
| PRJNA792009 | ENA
| PRJNA791980 | ENA
2016-09-01 | E-GEOD-68531 | biostudies-arrayexpress
| PRJNA1445079 | ENA
2019-06-11 | GSE132472 | GEO
2019-06-11 | GSE132473 | GEO
2017-03-01 | GSE90518 | GEO
2020-10-08 | GSE156886 | GEO