Genomics

Dataset Information

0

Gene Expression analysis of hESC B2M knock-out


ABSTRACT: The clinical use of human pluripotent stem cells and their derivatives is limited by the rejection of transplanted cells due to differences in their HLA genes. This has led to the proposed use of histocompatible, patient-specific stem cells, however the preparation of many different stem cell lines for clinical use is a daunting task. Here we develop two distinct genetic engineering approaches that address this problem. First, we use a combination of gene targeting and mitotic recombination to derive HLA-homozygous embryonic stem cell (ESC) subclones from an HLA-heterozygous parental line. A small bank of HLA-homozygous stem cells with common haplotypes would match a significant proportion of the population. Second, we derive HLA class I-negative cells by targeted disruption of both alleles of the B2M gene in ESCs. Mixed leukocyte reactions and peptide-specific HLA-restricted CD8+ T cell responses were reduced in class I-negative cells that had undergone differentiation in embryoid bodies. These B2M-/- ESCs could act as universal donor cells in applications where the transplanted cells do not express HLA class II genes. Both approaches used adeno-associated virus (AAV) vectors for efficient gene targeting in the absence of potentially genotoxic nucleases, and produced pluripotent, transgene-free cell lines.

ORGANISM(S): Homo sapiens

PROVIDER: GSE42289 | GEO | 2014/01/01

SECONDARY ACCESSION(S): PRJNA179552

REPOSITORIES: GEO

Similar Datasets

2014-01-01 | E-GEOD-42289 | biostudies-arrayexpress
2012-06-18 | E-GEOD-38798 | biostudies-arrayexpress
2011-02-28 | E-GEOD-27544 | biostudies-arrayexpress
2022-06-30 | GSE203074 | GEO
2016-07-27 | E-GEOD-80736 | biostudies-arrayexpress
2006-04-01 | GSE4157 | GEO
2024-02-12 | GSE249316 | GEO
2009-06-22 | GSE7948 | GEO
2011-02-28 | GSE27544 | GEO
2016-07-27 | GSE80736 | GEO