Transcriptomics,Genomics

Dataset Information

157

Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants


ABSTRACT: Seed germination is important to soybean (Glycine max) growth and development, ultimately affecting soybean yield. A lower seed field emergence has been the main hindrance for breeding soybeans low in phytate. Although this reduction could be overcome by additional breeding and selection, the mechanisms of seed germination in different low phytate mutants remain unknown. In this study, we performed a comparative transcript analysis of two low phytate soybean mutants (TW-1 and TW-1-M), which have the same mutation, a 2 bp deletion in GmMIPS1, but show a significant difference in seed field emergence. Overall design: 18 samples were analyzed in this research, and three replicates were included.

INSTRUMENT(S): Illumina HiSeq 4000 (Glycine max)

SUBMITTER: fengjie yuan  

PROVIDER: GSE83152 | GEO | 2016-12-05

SECONDARY ACCESSION(S): PRJNA325298

REPOSITORIES: GEO

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