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19

Methylation profiling of lung squamous cell carcinomas vs surrounding normal tissue


ABSTRACT: Methylated genomic fragments from tumor and matching normal DNA were enriched with the methylated-CpG island recovery assay (MIRA); amplified, labeled and hybridized on Agilent CpG island tiling oligo arrays. Samples from tumor were labeled with Cy5 while the matching normal were labeled with Cy3 so that methylation differences can be detected. Keywords: Cancer Overall design: Comparison of methylation patterns between tumor and matching normal; five patients with stage I lung squamous cell carcinoma

INSTRUMENT(S): Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Feature Number version)

ORGANISM(S): Homo sapiens  

SUBMITTER: Xiwei Wu   

PROVIDER: GSE9622 | GEO | 2007-11-17

SECONDARY ACCESSION(S): PRJNA103473

REPOSITORIES: GEO

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