Unknown

Dataset Information

22

Methylation profiling of lung squamous cell carcinomas vs surrounding normal tissue


ABSTRACT: Methylated genomic fragments from tumor and matching normal DNA were enriched with the methylated-CpG island recovery assay (MIRA); amplified, labeled and hybridized on Agilent CpG island tiling oligo arrays. Samples from tumor were labeled with Cy5 while the matching normal were labeled with Cy3 so that methylation differences can be detected. Keywords: Cancer Overall design: Comparison of methylation patterns between tumor and matching normal; five patients with stage I lung squamous cell carcinoma

INSTRUMENT(S): Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Feature Number version)

ORGANISM(S): Homo sapiens  

SUBMITTER: Xiwei Wu  

PROVIDER: GSE9622 | GEO | 2007-11-17

SECONDARY ACCESSION(S): PRJNA103473

REPOSITORIES: GEO

Similar Datasets

2010-05-25 | E-GEOD-9622 | ArrayExpress
2009-02-18 | GSE14865 | GEO
2010-05-05 | E-GEOD-14865 | ArrayExpress
2012-04-30 | GSE18814 | GEO
2012-04-29 | E-GEOD-18814 | ArrayExpress
2010-01-01 | GSE19391 | GEO
2011-11-14 | GSE33545 | GEO
2010-05-16 | E-GEOD-19391 | ArrayExpress
2011-11-14 | E-GEOD-33545 | ArrayExpress
2010-08-20 | GSE22884 | GEO