Genomics

Dataset Information

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Mnase-Seq study of Arabidopsis thaliana mutant chr5


ABSTRACT: Comparative study of nuclesome occupancy in Arabidopsis thaliana mutant chr5 and wild type strain. Overall design: Mnase digest of chromatin from wt and chr5 mutants, library construction of protected DNA, Illumina Sequencing

INSTRUMENT(S): Illumina HiSeq 2000 (Arabidopsis thaliana)

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Jian Hua 

PROVIDER: GSE99639 | GEO | 2019-05-23

REPOSITORIES: GEO

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Publications

The Arabidopsis Chromatin-Remodeling Factor CHR5 Regulates Plant Immune Responses and Nucleosome Occupancy.

Zou Baohong B   Sun Qi Q   Zhang Wenli W   Ding Yuan Y   Yang Dong-Lei DL   Shi Zhenying Z   Hua Jian J  

Plant & cell physiology 20171201 12


ATP-dependent chromatin-remodeling factors use the energy of ATP hydrolysis to alter the structure of chromatin and are important regulators of eukaryotic gene expression. One such factor encoded by CHR5 (Chromatin-Remodeling Factor 5) in Arabidopsis (Arabidopsis thaliana) was previously found to be involved in regulation of growth and development. Here we show that CHR5 is required for the up-regulation of the intracellular immune receptor gene SNC1 (SUPPRESSOR OF npr1-1, CONSTITUTIVE1) and con  ...[more]

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