Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

2 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 1000

R_HAN_01.05 Mice fed with prebiotics or antibiotics IIN

ABSTRACT: Mice were fed with prebiotic during 3 weeks before harvesting serum. Mice has 3 days antibiotics treatment.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus Domesticus

SUBMITTER: audrey LE GOUELLEC

PROVIDER: MSV000084107 | MassIVE | Thu Jul 18 15:44:00 BST 2019

REPOSITORIES: MassIVE

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

GNPS - R_HAN_01.05 Mice fed with prebiotics or antibiotics IIN

Project description:Mice were fed with prebiotic during 3 weeks before harvesting serum. Mice has 3 days antibiotics treatment.

2019-07-18 | MSV000084107 | GNPS

Metagenomic sequencing of mice with different treatments / 16S rRNA sequencing of mice before and after the use antibiotics

Project description:Metagenomic sequencing of mice with different treatments: Mice were randomly divided into donor control group (Donor + MRS), constipation model group (STC + MRS), or a Lactobacillus acidophilus treated group (STC + La): A humanized mouse model was established by intragastric administration of fecal bacterial liquid from healthy donors or STC patients on alternate days, followed by continuous administration of Lactobacillus acidophilus in treatment group. Finally, the feces of each group of mice were collected, and the intestinal microbial communities of the mice were analyzed through metagenomic sequencing. 16S rRNA sequencing of mice before and after the use antibiotics: Before and after treating the mice with antibiotics, the mice's feces were collected for 16s rRNA sequencing respectively.

2026-03-11 | E-MTAB-16505 | biostudies-arrayexpress

Serum proteomics of wild type mice and Mdm2 adipocyte-specific knock-in mice fed high-fat diet

Project description:The serum samples from wild type mice fed high-fat diet for 12 weeks (WT_Serum) and Mdm2 adipocyte-specific knock-in mice fed high-fat diet for 12 weeks (KI_Serum) were mixed separately, and subjected to proteomic study by Label-free quantitative techniques and mass spectrometry-based proteomics techniques in Jingjie PTM BioLab (Hangzhou) Co. Ltd (www.ptm-biolab.com.cn). The difference was determined by 1.5-fold-change criterion, FDR < 0.01.

2022-08-11 | PXD034069 | Pride

Gene expression in Kras-driven lung tumors in mice fed with standard or high calorie diet

Project description:The results provide information on the gene expression in dissected KrasG12D-driven lung tumor in mice. Mice were fed on high-calorie diet starting 3 months before tumor induction. Dissected tumors were obtained 11 weeks after tumor induction.

2014-03-27 | GSE56260 | GEO

RNA-seq analysis of intestinal epithelia of Ruminococcus torques treated mice

Project description:Purpose: To explore the influence of Ruminococcus torques treatment in mice intestinal epithelia. Method: Mice were pretreated with antibiotics for 3 days, then mice were fed with a high-fat diet and gavaged with PBS or R. torques (108 CFU/mouse) every 3 days for 2 weeks. mRNA profiles were generated by deep sequencing.Results: Several signaling pathways were changed after R. torques treatment, including response to hypoxia pathway. R. torques treatment significantly inhibits Epas1-mediated transcription effect.

2024-06-04 | GSE265852 | GEO

Gene expression changes in cardiomyocytes from normal mice and diabetic, high fat diet-fed mice exposed to the DPP-4 inhibitor linagliptin

Project description:Cardiomyocytes were isolated from the hearts of C57BL/6 mice or C57BL/6 mice that had been fed a high fat diet for 26 weeks, receiving an intraperitoneal injection of streptozotocin 12 weeks into the study. Cells were exposed to either linagliptin (9nmol/L) or vehicle (0.1% DMSO) for 24 hours before comparison of RNA levels by RNA-sequencing.

2020-08-12 | GSE144796 | GEO

The eWAT proteomics of wild type mice and Mdm2 adipocyte-specific knock-in mice fed high-fat diet

Project description:The epididymal adipose tissue (eWAT) samples from wild type mice fed high-fat diet for 12 weeks (H_WT_E) and Mdm2 adipocyte-specific knock-in mice fed high-fat diet for 12 weeks (H_KI_E) were mixed separately, and subjected to proteomic study by Label-free quantitative techniques and mass spectrometry-based proteomics techniques, etc. The proteomics of mixed eWAT samples were performed in Jingjie PTM BioLab (Hangzhou) Co. Ltd (www.ptm-biolab.com.cn). The difference was determined by 1.5-fold-change criterion, FDR < 0.01.

2022-08-11 | PXD034074 | Pride

Data in support of plasma proteomics study forearly markers of antibiotics dependent necrotising enterocolitis in preterm pigs

Project description:Most hospitalized preterm infants receive antibiotics (AB) in the first days of life to treat or prevent systemic infections. Short-term, early AB treatment may also prevent against the microbiota-dependent serious gut disorder, necrotising enterocolitis (NEC). However, it remains a challenge to predict or early detection of NEC in the first weeks of life and few diagnostic markers exist. Using preterm piglets as models for infants, we hypothesised that proteomic profiling could be used to identify new early plasma biomarkers of NEC with or without prior AB treatment. Preterm newborn pigs were treated with saline (CON) or antibiotics (ampicillin, gentamicin, and metronidazole), given enterally (ENT) or parenterally (PAR), and fed formula for four days to induce NEC. The gut was collected for scoring of NEC lesions and blood was collected for haematology and plasma proteomics

2021-09-08 | PXD015938 | Pride

Mouse-adapted SARS-CoV-2 infected Lungs from high-fat diet fed mice treated with anti-inflammatory agents

Project description:Lung samples were generated from male mice of C57BL/6J(B6) mice fed with high-fat diet for 10 weeks before infection.

2025-04-01 | E-MTAB-14621 | biostudies-arrayexpress

16s rDNA-sequencing of gastric flora in mice fed with high-salt diets

Project description:There are 10 mice in the experiment, named REC. The mice were fed with high salt diets (5% NaCl) for 4 weeks and then fed with normal salt diets for 4 weeks. Then extracted DNA from mice gastric flora to detect changes in the gastric flora of mice.

2019-07-13 | GSE134237 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data