Proteomics

Dataset Information

0

Data for: A practical guide for analysis of histone post-translational modifications by mass spectrometry: best practices and pitfalls


ABSTRACT: Histone proteomics from 5 human cell lines, discussed in publication: "A practical guide for analysis of histone post-translational modifications by mass spectrometry: best practices and pitfalls". Further explanation of data types, methods, and analysis are available in Data Explanation document in the Methods and Protocols folder.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

SUBMITTER: John Denu  

PROVIDER: MSV000084298 | MassIVE |

REPOSITORIES: MassIVE

altmetric image

Publications

A practical guide for analysis of histone post-translational modifications by mass spectrometry: Best practices and pitfalls.

Thomas Sydney P SP   Haws Spencer A SA   Borth Laura E LE   Denu John M JM  

Methods (San Diego, Calif.) 20191207


Advances in mass spectrometry (MS) have revolutionized the ability to measure global changes in histone post-translational modifications (PTMs). The method routinely quantifies over 60 modification states in a single sample, far exceeding the capabilities of traditional western blotting. Thus, MS-based histone analysis has become an increasingly popular tool for understanding how genetic and environmental factors influence epigenetic states. However, histone proteomics experiments exhibit unique  ...[more]

Similar Datasets

2021-12-07 | GSE171980 | GEO
2016-03-02 | E-GEOD-66530 | biostudies-arrayexpress
| S-EPMC2951466 | biostudies-literature
| S-EPMC8652059 | biostudies-literature
2016-03-02 | GSE66530 | GEO
2022-02-07 | PXD018295 | Pride
| S-EPMC7051976 | biostudies-literature
| S-EPMC3499978 | biostudies-literature
| S-EPMC7323054 | biostudies-literature
| S-EPMC7435879 | biostudies-literature