Proline rich macrocyclic peptides (PRMPs) from marine sponges
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ABSTRACT: The mass spec data for PRMPs detected in marine sponges is deposited. Also the data differentiating leucine and isoleucine residues in cyclic peptides is deposited.
INSTRUMENT(S): Bruker ImpactII ultra-high-resolution Qq-ToF
Project description:This dataset consists of Spec-seq samples data for four tandem zinc finger proteins in human genome, each with two replicates. The Spec-seq is a medium throughput technique to characterize the binding specificity of a TF of interest to thousands of binding sites with resolution down to 0.2kT. Similar samples were deposited to NCBI GEO database before (GSE188166). The data analysis workflow for each ZFP can be accessed through https://github.com/zeropin/ZFPCookbook.
Project description:Here we report the gene expression profile of T-ALL cell line - Jurkat, cultured in control vs 25% restricted media of 7 Essential amino acids (Histidine, Methionine, Valine, Leucine, Isoleucine, Phenylalanine and Tryptophan) and collected at Day 3