Proteomics

Dataset Information

0

Microbial Co-Culture Circadian Control Proteomics


ABSTRACT: Mono and co-cultured (dense OD) S. elongatus and R. toruloides with light vs dark treatment. TMT16 fractions for redox and global proteomics. Samples were processed using the SP3-based multi-PTM workflow (Gluth et al, 2024, MCP). Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. PlexedPiper was used to link peptide identifications with MASIC quantification data. Normalization was performed using the global median method, and redox data were further normalized to the corresponding global dataset.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Rhodotorula Toruloides (ncbitaxon:5286) Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140)

SUBMITTER: Wei-Jun Qian  

PROVIDER: MSV000099883 | MassIVE | Wed Nov 12 19:44:00 GMT 2025

SECONDARY ACCESSION(S): PXD070670

REPOSITORIES: MassIVE

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2025-11-13 | MSV000099892 | MassIVE
2023-02-28 | GSE225703 | GEO
2023-08-10 | GSE206586 | GEO
2022-03-02 | PXD029500 | Pride
2022-03-02 | PXD031647 | Pride
2023-05-12 | MTBLS7584 | MetaboLights
2025-11-14 | MSV000099912 | MassIVE
2025-11-14 | MSV000099914 | MassIVE
2007-11-01 | GSE9124 | GEO
2016-08-18 | GSE74439 | GEO