Metabolomics

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Pathogen-induced phenolic acids biosynthesis is associated with deleterious microbiome changes during Plasmodiophora brassicae-induced clubroot in Pakchoi


ABSTRACT:

Plant diseases have an important impact on the agricultural economy, often causing a decrease in crop yield and quality (Huang et al., 2020). Cruciferous plants can be used as both crops and vegetables, and have important application value. For example edible and oil sources, animal feeds and human biomedicine (Wittkop et al., 2009) (Li et al., 2022). Cruciferous crops are also susceptible to plant diseases, with clubroot being the major disease (Khalid et al., 2022). The pathogen that causes clubroot is Plasmodiophora brassicae, an obligate biotrophic protist and plasmodiophorid (Khalid et al., 2022). After plant infection P. brassicae, the root galls, stunted growth and accelerated flowering (Schuller and Ludwig-Müller, 2016). Meanwhile, P. brassicae can infect almost all cruciferous crops and lead to yields and quality losses of oil crops and vegetables worldwide (Khalid et al., 2022).


Here, we hypothesized that Pakchoi disease-resistant plants recruited beneficial microorganisms to reduce clubroot disease infestation. The enhanced recruitment of plant-beneficial microorganisms is hypothesized to occur via changes in Pakchoi root exudates, and some beneficial key microorganisms play a decisive role in the resistance to clubroot disease infection. To test this hypothesis, (1) we evaluated the establishment of soil microbiome in roots and rhizosphere in susceptible and disease-resistant plants; (2) to analyze the changes in the metabolome of rhizosphere soil of susceptible and resistant varieties of Pakchoi, so as to provide clues for the recruitment of beneficial bacteria; (3) the association analysis of metabolome and microbiome was used to determine the control effect of key species on clubroot disease.

INSTRUMENT(S): Liquid Chromatography MS - negative - reverse phase, Liquid Chromatography MS - positive - reverse phase

PROVIDER: MTBLS10976 | MetaboLights | 2025-03-31

REPOSITORIES: MetaboLights

Dataset's files

Source:
Action DRS
QC1_N.mzML Mzml
QC2_N.mzML Mzml
QC3_N.mzML Mzml
SK1_N.mzML Mzml
SK2_N.mzML Mzml
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