Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rat (Rattus norvegicus) RNA-Seq containing SHAM, STROKE and MANF groups

ABSTRACT: Rat (Rattus norvegicus) RNA-Seq containing SHAM, STROKE and MANF groups

PROVIDER: PRJEB34456 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Rat (Rattus norvegicus) RNA-Seq containing SHAM, STROKE and MANF groups

Project description:Samples from three groups, SHAM operated group and two STROKE operated groups treated two days post operation with AAV1-eGFP control and AAV1-MANF treatment were sequenced and analysed for differential gene expression

2020-04-12 | E-MTAB-8339 | biostudies-arrayexpress

Molecular characterization of the brain peri-infarct region after post-stroke MANF administration

Project description:Shotgun proteomics analysis of brain peri-infarct region from rats subjected to ischemic stroke and treated with AAV-MANF or a control AAV-eGFP, compared to each other and to rats subjected to a sham operation.

2019-05-28 | MSV000083869 | MassIVE

postnatal fluoxetine evoked gene expression changes in the rat hippocampus

Project description:to understand the consequences of chronic exposure to fluoxetine during postnatal life on global transcriptional changes withing the rat hippocamps Agilent one-color experiment,Organism: Rattus Norvegicus, Agilent-016352 Genotypic designed Custom Rattus Norvegicus 8x15k, Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442)

2013-12-01 | E-GEOD-42940 | biostudies-arrayexpress

Hypoxia transcriptome sequencing of blind mole rat (BMR, Spalax galili) and rat (Rattus norvegicus)

Project description:Deep sequencing of mRNA from Spalax galili and Rattus norvegicus

2014-06-05 | GSE49485 | GEO

RNA-Seq of tissues from Rat eye and retina samples

Project description:We report RNA-Seq experiments of eye and retinal tissues from Rattus Norvegicus

2016-09-12 | GSE84932 | GEO

Genome-wide identification of enhancer domains in the healthy and post-stroke mouse cortices

Project description:We report the identification of enhancer domains in sham and stroke mouse cerebral cortices by high-throughput profiling of H3K27Ac chromatin modification. A total of 35.4, 28.8 and 29.6 million reads were generated from chromatin immunoprecipitated DNA from sham, stroke and pooled input samples. This resulted in 55,571 peaks in sham and 56,110 peaks in stroke samples representing 50408 and 51,292 active regions, respectively. These active regions represent putative enhancer domains.

2020-11-12 | GSE135480 | GEO

To examine the influence of the early stress of maternal separation on the hippocampal transcriptome in young adulthood

Project description:In this study, we examined the consequences of the early stress (ES) of maternal separation on hippocampal gene expression in young adulthood. Young adult (2 months old) ES animals exhibit hippocampal transcriptome changes with a significant regulation of genes associated with intracellular signaling, MAP kinase signaling, plasma membrane function, neurotransmitter and neuropeptide receptors and cytoskeletal components. Agilent one-color experiment, Agilent-024724 Genotypic-designed Custom Rattus Norvegicus 8x15k; Organism: Rattus norvegicus; Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442); Biological replicates: 4 per treatment group.

2013-10-11 | E-GEOD-29412 | biostudies-arrayexpress

Expression data from MCAO or Sham operated rat blood [miRNA]

Project description:In the search for stroke biomarkers, miRNAs are gaining attention. To investigate novel miRNAs that work as stroke biomarkers, we used Middle Cerebral Artery Occlusion model of rats. By using microarray analysis and comparing with Sham operated rats, we extracted the miRNAs whose expressions are alterated by stroke.

2018-02-15 | GSE97532 | GEO

Expression data from MCAO or Sham operated rat blood [mRNA]

Project description:To analyze the gene expression alteration after stroke, we used Middle Cerebral Artery Occlusion model of rats. By comparing with Sham operated rats, we extracted the mRNAs whose expressions are alterated by stroke. Using microarray analysis, we aimed to grasp the overall expression alteration of mRNA in blood after stroke.

2018-02-14 | GSE97533 | GEO

Expression data from MCAO or Sham operated rat brain [mRNA]

2018-07-12 | GSE97537 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data