Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

P53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells

ABSTRACT: p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells

PROVIDER: PRJNA517455 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [Ribo-seq]

Project description:p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [Ribo-seq]

| PRJNA517458 | ENA

p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [RNA-seq]

Project description:p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [RNA-seq]

| PRJNA517459 | ENA

p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [RNA-seq]

Project description:To identify p53-regulated lncRNAs responsive to DNA damage in human hepatocellular carcinoma (HCC) cells, we conducted paired-end and strand-specific RNA-seq using HepG2 wild-type and p53-knockout (HepG2-KO-p53) cells, which were devoid of p53 protein, using the CRISPR-Cas9 system treated with or without the DNA-damaging agent adriamycin (ADR)

2020-07-18 | GSE125756 | GEO

p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-07-18 | GSE125758 | GEO

p53-inducible long non-coding RNAs encode functional peptides in hepatocellular carcinoma cells [Ribo-seq]

Project description:To globally analyse the lncRNAs with potential coding ability upon DNA damage, we performed Ribo-seq using ADR-treated HepG2 cells. The HepG2 cells were treated with 500 ng/mL ADR for 24 h, and cycloheximide (CHX) was added to inhibit the translational elongation of ribosomes.Furthermore,we identified the candidate ORFs with the selected RPF reads using the RiboCode software.

2020-07-18 | GSE125757 | GEO

Production ENCODE project

Project description:Production projects for the human ENCODE project

| PRJNA63441 | ENA

Pilot ENCODE Project

Project description:Pilot projects for the human ENCODE project.

| PRJNA13681 | ENA

Mouse ENCODE project

Project description:The mouse ENCODE (ENCyclopedia Of DNA Elements) Project.

| PRJNA50617 | ENA

Human ENCODE Project

Project description:The human ENCODE (ENCyclopedia Of DNA Elements) project

| PRJNA30707 | ENA

A new strategy to identify the long-distance mobile peptides from xylem sap.

Project description:Total RNAs were extracted from internodes and roots of 18 day-after-germination soybean plants, and the expression levels of the genes that encode xylem sap associated peptides or proteins were analyzed.

2015-10-23 | E-MTAB-5052 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data