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Cucumis sativus strain:cucumber | breed:LuFeng

ABSTRACT: Cucumis sativus strain:cucumber | breed:LuFeng

PROVIDER: PRJNA542511 | ENA |

REPOSITORIES: ENA

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Proteomic Analysis Reveals Key Proteins Involved in Ethylene-Induced Adventitious Root Development in Cucumber (Cucumis sativus L.)

Project description:Ethylene, as a signaling hormone molecule, is proved to have essential role in the process of root development. In the present study, cucumber (Cucumis sativus L.) seedlings were employed to estimate differentially expressed proteins (DEPs) during the adventitious rooting using iTRAQ technique and proteomics analysis. Out of the 5014 DEPs, 115 DEPs were considered as identified proteins, and among them, 24 DEPs are interesting proteins abundance.

2020-01-15 | PXD016444 | Pride

Cucumis sativus cultivar:cucumber

Project description:Cucumis sativus cultivar:cucumber Raw sequence reads

| PRJNA767264 | ENA

Comparative transcriptomic analysis reveals the roles of microtubule-related genes and transcription factors in fruit length regulation in cucumber (Cucumis sativus)

Project description:Cucumber (Cucumis sativus L.) fruit is a type of fleshy fruit that is harvested immaturely. Early fruit development directly determines the final fruit length and diameter, and consequently the fruit yield and quality. Different cucumber varieties display huge variations of fruit length, but how fruit length is determined at the molecular level remains poorly understood. To understand the genes and gene networks that regulate fruit length in cucumber, high throughout RNA-seq data were used to compare the transcriptomes of early fruit from two near isogenic lines with different fruit lengths. 3955 genes were found to be differentially expressed, among which 2368 genes were significantly up-regulated and 1587 down-regulated in the line with long fruit. Microtubule and cell cycle related genes were dramatically activated in the long fruit, and transcription factors were implicated in the fruit length regulation in cucumber. Thus, our results built a foundation to dissect the molecular mechanism of fruit length control in cucumber, a key agricultural trait of significant economic importance. Comparative analysis of fruit from two near-isogenic lines, 408 (long fruit) and 409 (short fruit), was employed to discover genes and networks that regulate the fruit length. Two biological replicates were used from each line.

2015-08-11 | E-GEOD-60346 | biostudies-arrayexpress

Comparative transcriptomic analysis reveals the roles of microtubule-related genes and transcription factors in fruit length regulation in cucumber (Cucumis sativus)

2015-08-11 | GSE60346 | GEO

Cucumis sativus breed:9930

Project description:Cucumis sativus breed:9930 Epigenomics

| PRJNA380315 | ENA

Cucumis sativus breed:9930

Project description:Cucumis sativus breed:9930 Epigenomics

| PRJNA380297 | ENA

Cucumis sativus breed:9930

Project description:Cucumis sativus breed:9930 Epigenomics

| PRJNA380306 | ENA

Cucumis sativus breed:9930

Project description:Cucumis sativus breed:9930 Epigenomics

| PRJNA380309 | ENA

Cucumis sativus cultivar:cucumber

Project description:Cucumis sativus transcriptome

| PRJNA359788 | ENA

SPATULA and ALCATRAZ confer fruit cavity and female sterility via mediating transmitting tract development in cucumber

Project description:The successful fusion of sperms and eggs need firstly the reception of pollens by stigmatic papillae, and then the unobstructed transmitting tract (TT) providing an extension channel for pollen tubes carrying with sperm cells. However, the genes involved in transmitting tract specification and cavity formation in cucumber remained largely unknown. Here, we characterized the bHLH gene, Cucumis sativus SPATULA (CsSPT) and its redundant function with Cucumis sativus ALCATRAZ (CsALC) in TT development and stigma convergence in cucumber.

2022-07-06 | GSE186397 | GEO

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