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Omics score: 47

Comparative proteome analysis in different media using three Xanthomonas species

ABSTRACT: Purpose -Comparison of proteome incubated in different media (rich and minimal media) -Three Xanthomonas species were used (Xanthomonas oryzae pv. oryaze, X. campestris pv. vesicatoria, and X. axonopodis pv. glycines. -Shotgun proteomic was used

INSTRUMENT(S): LTQ

ORGANISM(S): Xanthomonas campestris pv. vesicatoria str. 85-10 Xanthomonas citri pv. glycines str. 8ra Xanthomonas oryzae pv. oryzae PXO99A

TISSUE(S): Cell Culture

DISEASE(S): Not Available

SUBMITTER: Sang-Wook Han

LAB HEAD: Sang-Wook Han

PROVIDER: PXD006310 | Pride | 2017-10-23

REPOSITORIES: Pride

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Comparative Proteomic Analysis of Three Xanthomonas spp. Cultured in Minimal and Rich Media.

Park Hye-Jee HJ Bae Nahee N Park Hanbi H Kim Dae-Wi DW Han Sang-Wook SW

Proteomics 20171120 23-24

Bacteria change their gene expression when exposed to different nutrient conditions. The levels of proteins do not always correlate with those of RNAs, hence proteomic analysis is required for understanding how bacteria adapt to different conditions. Herein, differentially abundant proteins from Xanthomonas oryzae pv. oryzae (Xoo), X. campestris pv. vesicatoria (Xcv), and X. axonopodis pv. glycines (Xag), which were cultured in rich media and in minimal media, were determined using label-free sh ...[more]

PMID: 29044975

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