Profiling of Escherichia coli isolated from Crohn’s disease patients after adhesion and invasion in CaCo cell line.

ABSTRACT: Three AIEC strains were isolated from CD patients. We analyzed three types of cell: before adhesion and adhesion-invasion(control), after adhesion-invasion and after invasion. Proteins were assessed in an untargeted label-free bottom-up proteomic experiment using IDA approach (i.e. Information Dependent Acquisition) on Sciex TripleTOF 6600 Q-TOF mass-spectrometer couplet with LFQ (label-free quantification) by MaxQuant software. Dataset covers 54 samples (three biological replicates and two technical).

INSTRUMENT(S):

ORGANISM(S): Escherichia Coli

TISSUE(S): Caco-2 Cell

DISEASE(S): Crohn's Disease

SUBMITTER: Olga Bukato  

LAB HEAD: Gleb Fisunov

PROVIDER: PXD014250 | Pride | 2019-11-14

REPOSITORIES: Pride