Proteomics

Dataset Information

0

Charaterising the surfaceome of primary equine chondrocytes


ABSTRACT: The aim of this study was to characterize the surfaceome of primary equine chondrocytes isolated from healthy joints following exposure to the pro-inflammatory cytokines interleukin-1-beta (IL-1β) and tumour necrosis factor-alpha (TNF-α). We employed combined methodology that we recently developed for investigating the surfaceome in stem cells. Membrane proteins were isolated using an aminooxy-biotinylation technique and analysed by mass spectrometry using high throughput shotgun proteomics. Amongst the 431 unique cell surface proteins identified, a high percentage of low-abundance proteins, such as ion channels, receptors and transporter molecules were detected. A high number of proteins exhibited different levels of expression following chondrocyte stimulation with pro-inflammatory cytokines. LPR-1, thrombospondin, VDAC1-2 and annexin A1 were chosen for further analysis and validation by western blotting as proteins of special interest. Our results provide, for the first time, a repository for proteomic data on differentially expressed low-abundance membrane proteins on the surface of chondrocytes in response to pro-inflammatory stimuli.

INSTRUMENT(S): amaZon ETD

ORGANISM(S): Equus Caballus (horse)

TISSUE(S): Chondrocyte, Articular Cartilage

DISEASE(S): Osteoarthritis

SUBMITTER: David Boocock  

LAB HEAD: David Boocock

PROVIDER: PXD014773 | Pride | 2020-07-02

REPOSITORIES: Pride

altmetric image

Publications

Alterations in the chondrocyte surfaceome in response to pro-inflammatory cytokines.

Jeremiasse Bernadette B   Matta Csaba C   Fellows Christopher R CR   Boocock David J DJ   Smith Julia R JR   Liddell Susan S   Lafeber Floris F   van Spil Willem E WE   Mobasheri Ali A  

BMC molecular and cell biology 20200626 1


<h4>Background</h4>Chondrocytes are exposed to an inflammatory micro-environment in the extracellular matrix (ECM) of articular cartilage in joint diseases such as osteoarthritis (OA) and rheumatoid arthritis (RA). In OA, degenerative changes and low-grade inflammation within the joint transform the behaviour and metabolism of chondrocytes, disturb the balance between ECM synthesis and degradation, and alter the osmolality and ionic composition of the micro-environment. We hypothesize that chond  ...[more]

Similar Datasets

2011-06-01 | E-MTAB-654 | biostudies-arrayexpress
2011-03-02 | E-MEXP-3129 | biostudies-arrayexpress
2016-06-30 | E-GEOD-75181 | biostudies-arrayexpress
2023-03-28 | E-MTAB-12770 | biostudies-arrayexpress
2011-07-28 | E-GEOD-23492 | biostudies-arrayexpress
2016-03-01 | E-GEOD-68760 | biostudies-arrayexpress
2009-05-11 | E-GEOD-15069 | biostudies-arrayexpress
2018-05-15 | E-MTAB-6656 | biostudies-arrayexpress
2011-03-09 | E-MTAB-571 | biostudies-arrayexpress
2018-12-24 | E-MTAB-7430 | biostudies-arrayexpress