Proteomics

Dataset Information

0

The catalytic mechanism of vitamin K epoxide reduction in a cellular environment


ABSTRACT: Vitamin K epoxide reductases (VKOR) constitute a major family of integral membrane thiol oxidoreductases. In humans, VKOR sustains blood coagulation and bone mineralization through the vitamin K cycle. Previous chemical models assumed that the catalysis of human VKOR (hVKOR) starts from a fully reduced active site. This state, however, constitutes only a minor cellular fraction (5.6%). Thus, how hVKOR catalysis is carried out in the cellular environment remains largely unknown. Here we use quantitative mass spectrometry (MS) and electrophoretic mobility analysis to show that KO forms a covalent complex with a cysteine mutant mimicking hVKOR in a partially oxidized state. Trapping of this covalent reaction intermediate suggests that the partially oxidized state is catalytically active in cells. To investigate this activity, we analyze the correlation between the cellular activity and the cellular cysteine status of hVKOR. We find that the partially oxidized hVKOR has a considerably lower activity than hVKOR with a fully reduced active site. Although there are more partially oxidized hVKOR than fully reduced hVKOR in cells, these two reactive states contribute about equally to the overall hVKOR activity, and hVKOR catalysis can initiate from either of these states. Overall, the combination of MS quantification and biochemical analyses reveal the catalytic mechanism of this integral membrane enzyme in a cellular environment.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Kidney Epithelial Cell, Cell Culture

DISEASE(S): Vitamin K Deficiency Bleeding

SUBMITTER: Guomin Shen  

LAB HEAD: Weikai Li

PROVIDER: PXD020676 | Pride | 2020-12-03

REPOSITORIES: Pride

Similar Datasets

2017-03-30 | PXD003774 | Pride
2021-09-10 | PXD023620 | Pride
2023-05-03 | PXD032104 | Pride
2021-09-09 | PXD021261 | Pride
2023-10-04 | PXD038009 | Pride
| PRJNA107377 | ENA
2020-07-28 | GSE152811 | GEO
2016-10-25 | E-MTAB-4264 | biostudies-arrayexpress
2016-08-31 | E-MTAB-4300 | biostudies-arrayexpress
| PRJNA193302 | ENA