Proteomics

Dataset Information

Multiplexed quantitative proteomics of CD4 T cell-mediated postsynaptic dendritic cells (DC)


ABSTRACT: We aimed to characterize the proteome remodeling in DCs induced upon antigen presentation. To do so, we used an in vitro antigen presentation model to generate postsynaptic (psDC) or nonsynaptic (nsDC) DCs similarly to previously reported (Alcaraz-Serna et al., 2021). Bone marrow-derived DCs (BMDCs), which had been activated with LPS and pulsed (psDC) or not (nsDC) with the ovalbumin peptide OVA323-339, were co-cultured with resting CD4+ T cells from OT-II mice to allow cognate antigen-dependent immune synapse formation (psDC) or not (nsDC). DCs were then purified for proteomic analysis by using mass spectrometry based on multiplexed isotopic labeling peptides approach.

INSTRUMENT(S):

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Dendritic Cell

SUBMITTER: Inmaculada Jorge  

LAB HEAD: Jesús Vázquez Cobos

PROVIDER: PXD039035 | Pride | 2024-01-26

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
IJ_FSM_TMT_1.msf Msf
IJ_FSM_TMT_1.raw Raw
IJ_FSM_TMT_2.msf Msf
IJ_FSM_TMT_2.raw Raw
IJ_FSM_TMT_3.msf Msf
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