Proteomics

Dataset Information

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A-to-I mRNA editing enables bacteria to produce two protein versions from a single gene and affects bacterial growth


ABSTRACT: Adenosine-to-inosine (A-to-I) mRNA editing can affect the sequence and function of translated proteins because the ribosome reads inosine (I) as guanosine (G). Previously, we discovered that A-to-I mRNA editing occurs in Escherichia coli. However, the prevalence of A-to-I mRNA editing across bacteria and its biological significance are still unknown. Here, we show that A-to-I mRNA editing occurs in hundreds of genes across dozens of bacterial species. We find that editing events occur within and require a conserved sequence motif. Notably, most editing events (80%) are predicted to recode protein sequences. Indeed, by mass spectrometry, we show for the first time that A-to-I mRNA editing enables bacteria to produce two versions of a protein from a single gene. Finally, we find that perturbing mRNA editing in Acinetobacter baylyi affects bacterial growth, especially at high temperatures. Overall, our work reveals that A-to-I mRNA editing is widespread and can impact bacterial physiology, likely by modulating protein function

INSTRUMENT(S):

ORGANISM(S): Acinetobacter Baylyi

SUBMITTER: Dganit Melamed Kadosh  

LAB HEAD: Dan Bar Yaacov

PROVIDER: PXD051887 | Pride | 2025-07-21

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Seq87734_44min_DDA_LIST_480Ex1.msf Msf
Seq87734_44min_DDA_LIST_480Ex1.raw Raw
Seq87735_44min_DDA_LIST_480Ex1.msf Msf
Seq87735_44min_DDA_LIST_480Ex1.raw Raw
Seq87736_44min_DDA_LIST_480Ex1.msf Msf
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Publications

A-to-I mRNA editing recodes hundreds of genes in dozens of species and produces endogenous protein isoforms in bacteria.

Elias Eyal E   Gifford Isaac I   Didi Liron L   Fargeon Ofir O   Arad Danielle D   Cohen-Pavon Rinat R   Sorek Gil G   Levin Liron L   Melamed Dganit D   Aspit Liam L   Barrick Jeffrey E JE   Bar-Yaacov Dan D  

Nucleic acids research 20250701 13


Adenosine-to-inosine (A-to-I) messenger RNA (mRNA) editing can affect the sequence and function of translated proteins and has been extensively investigated in eukaryotes. However, the prevalence of A-to-I mRNA editing in bacteria, its governing regulatory principles, and its biological significance are poorly understood. Here, we show that A-to-I mRNA editing occurs in hundreds of transcripts across dozens of gammaproteobacterial species, with most edits predicted to recode protein sequences. F  ...[more]

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