Proteomics

Dataset Information

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Modelling complex cardiovascular disease in mature organoid model


ABSTRACT: Cardiac maturation is an important developmental phase where there are profound biological and functional changes after birth in mammals. Herein, we use our profiling of human heart maturation in vivo to identify key drivers of maturation in our human cardiac organoid (hCO) model. In this dataset, we exemplified the applicability of our mature organoids in modelling cardiovascular disease. Pathogenesis of Desmoplakin (DSP) cardiomyopathies are driven by complex cellular interplay and changes in excitation-contraction coupling. A patient (MCHTB11), was screened against a 202 cardiac gene panel for clinically-relevant rare DNA variants (frequency < 0.04%). A homozygous 2 bp deletion was identified in the DSP gene, and recapitulated in our hCOs utilising CRISPR. In this screen, we also utilised INCB054329, a bromodomain extra-terminal inhibitor, to suppress diastolic dysfunction induced by the DSP mutant. In this dataset, we evaluate the proteomic remodelling induced by DSP-mutants (DSP) versus recovered mutants (CTRL), with and without INCB (n=3-4 for each group).

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Heart, Cell Culture, Embryonic Stem Cell

DISEASE(S): Cardiovascular System Disease

SUBMITTER: Harley Robinson  

LAB HEAD: James Hudson

PROVIDER: PXD054791 | Pride | 2025-04-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20240515_DM_DSP_CTRL_1.raw Raw
20240515_DM_DSP_CTRL_2.raw Raw
20240515_DM_DSP_CTRL_3.raw Raw
20240515_DM_DSP_INCB_1.raw Raw
20240515_DM_DSP_INCB_2.raw Raw
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Publications

Maturation of human cardiac organoids enables complex disease modeling and drug discovery.

Pocock Mark W MW   Reid Janice D JD   Robinson Harley R HR   Charitakis Natalie N   Krycer James R JR   Foster Simon R SR   Fitzsimmons Rebecca L RL   Lor Mary M   Devilée Lynn A C LAC   Batho Christopher A P CAP   Tuano Natasha N   Howden Sara E SE   Vlahos Katerina K   Watt Kevin I KI   Piers Adam T AT   Bibby Kaitlyn K   McNamara James W JW   Sutton Rebecca R   Iaprintsev Valerii V   Mathew Jacob J   Voges Holly K HK   Fortuna Patrick R J PRJ   Bass-Stringer Sebastian S   Vivien Celine C   Rae James J   Parton Robert G RG   Firulli Anthony B AB   Lisowski Leszek L   Huckstep Hannah H   Humphrey Sean J SJ   Lal Sean S   Konstantinov Igor E IE   Weintraub Robert G RG   Elliott David A DA   Ramialison Mirana M   Porrello Enzo R ER   Mills Richard J RJ   Hudson James E JE  

Nature cardiovascular research 20250625 7


Maturation of human pluripotent stem (hPS) cell-derived cardiomyocytes is critical for their use as a model system. Here we mimic human heart maturation pathways in the setting of hPS cell-derived cardiac organoids (hCOs). Specifically, transient activation of 5' AMP-activated protein kinase and estrogen-related receptor enhanced cardiomyocyte maturation, inducing expression of mature sarcomeric and oxidative phosphorylation proteins, and increasing metabolic capacity. hCOs generated using the d  ...[more]

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