Proteomics

Dataset Information

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Modelling complex cardiovascular disease in mature organoid model


ABSTRACT: Cardiac maturation is an important developmental phase where there are profound biological and functional changes after birth in mammals. Herein, we use our profiling of human heart maturation in vivo to identify key drivers of maturation in our human cardiac organoid (hCO) model. In this dataset, we exemplified the applicability of our mature organoids in modelling cardiovascular disease. Pathogenesis of Desmoplakin (DSP) cardiomyopathies are driven by complex cellular interplay and changes in excitation-contraction coupling. A patient (MCHTB11), was screened against a 202 cardiac gene panel for clinically-relevant rare DNA variants (frequency < 0.04%). A homozygous 2 bp deletion was identified in the DSP gene, and recapitulated in our hCOs utilising CRISPR. In this screen, we also utilised INCB054329, a bromodomain extra-terminal inhibitor, to suppress diastolic dysfunction induced by the DSP mutant. In this dataset, we evaluate the proteomic remodelling induced by DSP-mutants (DSP) versus recovered mutants (CTRL), with and without INCB (n=3-4 for each group).

INSTRUMENT(S): Q Exactive HF, Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Heart, Cell Culture, Embryonic Stem Cell

DISEASE(S): Cardiovascular System Disease

SUBMITTER: Harley Robinson  

LAB HEAD: James Hudson

PROVIDER: PXD054791 | Pride | 2025-04-17

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20240515_DM_DSP_CTRL_1.raw Raw
20240515_DM_DSP_CTRL_2.raw Raw
20240515_DM_DSP_CTRL_3.raw Raw
20240515_DM_DSP_INCB_1.raw Raw
20240515_DM_DSP_INCB_2.raw Raw
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