Proteomics

Dataset Information

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Co-translational determination of quaternary structures in chaperone factories


ABSTRACT: The HSP90/R2TP quaternary chaperone assembles key cellular machines, including the three nuclear RNA polymerases and many non-coding RNPs. Here, we show that the R2TP binds many partners co-translationally. Remarkably, its co-translational interactome reveals many novel potential clients, and side-by-side comparison of RIP-seq and quantitative proteomics identifies clients bound only co-translationally, only post-translationally or both. For pairs of subunits assembling together and bound co-translationally by R2TP, only a marginal proportion of their mRNAs is co-localized and co-translated. Instead, the HSP90 and R2TP chaperones induce the formation of dedicated factories, which are cytoplasmic R2TP foci accumulating client mRNAs, thus favoring co-translational interactions. The R2TP alternates between co- and post-translational steps in a cycle regulated by ATP: following co-translational loading, it accompanies completed subunits towards their partners and becomes released following ATP hydrolysis. Assembly of protein complexes is thus initiated early by chaperones and this mechanism, dubbed co-translational chaperone channeling (cha-cha), substitutes for the rarity of co-localized/co-translated mRNAs.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Large Intestine, Colon

DISEASE(S): Colorectal Carcinoma

SUBMITTER: Functional Proteomics Platform FPP  

LAB HEAD: Edouard Bertrand

PROVIDER: PXD061298 | Pride | 2026-01-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
OxidationMSites.txt Txt
RPAP3_220715_HF_10A_3_10.raw Raw
RPAP3_220715_HF_10B_3_10.raw Raw
RPAP3_220715_HF_10C_3_10.raw Raw
RPAP3_220715_HF_1A_05_10.raw Raw
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