Proteomics

Dataset Information

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Assessing inter-line reproducibility of a novel iPSC-derived 3D brain tissue model (3BTM) and comparison to 2D co-cultures


ABSTRACT: Stem-cell-based in vitro models offer promising potential to elucidate human brain cell functions and interactions under healthy conditions and in disease states. However, harnessing this potential is currently impaired by low reproducibility, maturity, and cell-type diversity of models. Therefore, we developed a novel 3D brain tissue model (3BTMs) containing neurons, astrocytes, and microglia with high reproducibility, maturity, and viability. To confirm reproducibility of culture generation, composition, and maturation across iPSC lines, and compare 3BTMs to 2D co-cultures of the same cells, we performed proteome analysis of 3BTMs from 3 independent wild-type cell lines over time and in comparison to 2D co-cultures, fetal and juvenile brain samples, and neural organoids from 2 independent lines.

INSTRUMENT(S):

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cerebral Cortex Neuron, Brain, Astrocyte, Microglial Cell

SUBMITTER: Stephan Mueller  

LAB HEAD: Stefan F. Lichtenthaler

PROVIDER: PXD069984 | Pride | 2026-02-23

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
AGDP_2501_01_Slot2-13_1_16818.d.zip Other
AGDP_2501_02_Slot2-50_1_16855.d.zip Other
AGDP_2501_03_Slot2-4_1_16809.d.zip Other
AGDP_2501_04_Slot1-18_1_16867.d.zip Other
AGDP_2501_05_Slot2-22_1_16827.d.zip Other
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