Project description:The goal of this study was to use microarrays to identify genes differentially regulated under conditions of formaldehyde stress relative to two other stress conditions (oxidative, osmotic) in an effort to identify genes that might be involved in a formaldehyde-specific stress response, rather than a general stress response, in the model methylotroph Methylobacterium extorquens AM1.
Project description:This dataset contains mass spectrometry data from a metabolomics experiment focused on metabolites from a iron and lanthanide-utilizing bacteria known as methylobacterium aquaticum. Lanthanides are used in alcohol dehydrogenation for this species.
Project description:This dataset contains mass spectrometry data from a metabolomics experiment focused on metabolites from a lanthanide-utilizing bacteria known as methylobacterium aquaticum. Lanthanides are used in alcohol dehydrogenation for this species. From the 2025/07/02 run.
Project description:We report RNA-seq datasets profiling the transcriptional response to a sudden change in growth substrate, from succinate to ethylamine. This detailed combined dataset provides a dynamic assessment of the transcriptional response to a metabolic perturbation. These datasets are the first reported RNA-seq datasets for gene expression in Methylobacterium extorquens AM1
Project description:This dataset contains mass spectrometry data from a metabolomics experiment focused on metabolites from a lanthanide-utilizing bacteria known as methylobacterium aquaticum. Lanthanides are used in alcohol dehydrogenation for this species. This run infused metals just prior to ionization to ideally more easily observe potential adducts. From the 2025/07/15 run.
Project description:Differential analysis of Methylobacterium extorquens DM4 in methanol versus dichloromethane condition using shotgun label free MS1 quantification approach
