Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Manihot esculenta strain:MTAI16

ABSTRACT: Sequencing of full-length enriched cassava cDNA library

PROVIDER: PRJDB14290 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR414870.fastq.gz	Fastqsanger.gz
	DRR414871.fastq.gz	Fastqsanger.gz
	DRR414872.fastq.gz	Fastqsanger.gz
	DRR414873.fastq.gz	Fastqsanger.gz
	DRR414874.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Mus musculus

Project description:Sequencing of First-strand cDNA Library Reveals Full-length Transcriptomes

| PRJNA267709 | ENA

Full-length mRNA sequencing reveals principles of poly(A) tail length control

Project description:We report FLAM-seq, a cDNA library preparation method coupled to PacBio single-molecule sequencing for profiling full-length mRNAs including their poly(A) tail.

2019-06-04 | GSE126465 | GEO

Oryza sativa Japonica Group

Project description:Full length cDNA project

| PRJNA13186 | ENA

Full-length circRNAs in IMR-90 and A549 cell lines using nanopore sequencing

Project description:To identify full-length circRNAs in lung normal and cancer cell lines, we enriched circRNAs by rRNA depletion, poly(A) tailing and Rnase R treatment and amplified circRNAs by rolling circular RT. We constructed library according to the protocol of Fangqing Zhao team's. Nanopore is used for full-length sequencing.

2025-05-27 | GSE262357 | GEO

Transcriptome of short RNA fraction in Rickettsia conorii

Project description:We constructed a small RNA cDNA library, using small RNA fraction with a length of 19-29 bases, and we performed deep sequencing of the cDNA library.

2013-03-02 | GSE27647 | GEO

Oxford nanopore transcriptome of cassava, Manihot esculenta variety TM12

Project description:Full length long read transcript sequences were used as guides along with other multi-omics data to build gene model annotation of Cassava.

2024-05-28 | GSE225361 | GEO

High-resolution quantitative profiling of tRNA abundance and modification status in eukaryotes by mim-tRNAseq

Project description:Measurements of cellular tRNA abundance are hampered by pervasive blocks to cDNA synthesis at modified nucleosides and the extensive similarity among tRNA genes. We overcome these limitations with modification-induced misincorporation tRNA sequencing (mim-tRNAseq), which combines a workflow for full-length cDNA library construction from mature tRNA with a simple-to-use computational analysis toolkit. Our method accurately captures tRNA abundance and modification status in multiple eukaryotes and is applicable to any organism with a known genome.

2021-02-12 | GSE152621 | GEO

Project description:Wheat full-length cDNA sequencing by NGS

| PRJDB4472 | ENA

Project description:full‐length cDNA sequencing integrated Helicoverpa assulta

| PRJNA587871 | ENA

Project description:full‐length cDNA sequencing integrated Helicoverpa assulta

| PRJNA589714 | ENA