Project description:Japanese cedar (Cryptomeria japonica) is an allogamous coniferous species that relies on wind-mediated pollen and seed dispersal, and it is one of the most important forestry tree species in Japan. For accelerating breeding, we collected massive SNPs based on ESTs from several organs using NGS, and thus carried out QTL, GWAS and GS based on high-density linkage maps.
Project description:Japanese cedar (Cryptomeria japonica) is an allogamous coniferous species that relies on wind-mediated pollen and seed dispersal, and it is one of the most important forestry tree species in Japan. For accelerating breeding, we collected massive SNPs based on ESTs from several organs using NGS, and thus carried out QTL, GWAS and GS based on high-density linkage maps.
2018-05-07 | GSE95618 | GEO
Project description:Construction of Genetic Linkage Maps from a Hybrid Family of Large Yellow Croaker (Larimichthys crocea)
| PRJNA786283 | ENA
Project description:orange-spotted grouper Epinephelus coioides genetic linkage maps construction
Project description:Porcine 60K BeadChip genotyping arrays (Illumina) are increasingly being applied in pig genomics to validate SNPs identified by re-sequencing or assembly-versus-assembly method. Here we report that more than 98% SNPs identified from the porcine 60K BeadChip genotyping array (Illumina) were consistent with the SNPs identified from the assembly-based method. This result demonstrates that whole-genome de novo assembly is a reliable approach to deriving accurate maps of SNPs.
2016-07-05 | GSE83910 | GEO
Project description:Construction of high-density genetic linkage maps in radish through RAD-seq
Project description:Discovery of SNPs and construction of high-density linkage map using Rad-seq for oil palm
| PRJDB5817 | ENA
Project description:Simultaneous and highly efficient construction of two independent sets of high-density linkage maps and draft sequences using an artificially generated hybrid organism
