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NG-Tax Mock communities

ABSTRACT: NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

PROVIDER: PRJEB11702 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR1121630_1.fastq.gz	Fastqsanger.gz
	ERR1121630_2.fastq.gz	Fastqsanger.gz
	ERR1121640_1.fastq.gz	Fastqsanger.gz
	ERR1121640_2.fastq.gz	Fastqsanger.gz
	ERR1121650_1.fastq.gz	Fastqsanger.gz

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Profile of gene expression in Tax positive (TaxP) cells compared with Tax negative (TaxN) cells.

Project description:Investigating the effect of Tax protein on the expression of genes in Jurkat cells. Current study will help us to elucidate the differential gene expression profiles of Tax positive Jurkat cells. The Tax-positive (TaxP) and Tax negative (TaxN) subline of Jurkat were established. mRNA isolated from TaxN or TaxP cell lines were analyzed using gene array.

2012-07-26 | E-GEOD-39601 | biostudies-arrayexpress

Profile of gene expression in Tax positive (TaxP) cells compared with Tax negative (TaxN) cells.

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Expression data from Human Tax transfected HeLa cell

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Expression data from Human Tax transfected HeLa cell

Project description:Human T cell leukemia virus type 1 (HTLV-1) Tax is potent activator of viral and cellular gene expression that interacts with a number of cellular proteins. In this study, a large-scale host cell signaling events related to cellular proliferation were used to identify genes involved in Tax-mediated cell signaling events related to cellular proliferation and apoptosis. HeLa cell transiently transfected with with pCAGGS vector for control sample was compared with HeLa cell transiently transfected with with pCAGGS-Tax-FLAG vector. These cells were incubated for 30h after transfection and were used for total RNA isolation.

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Expression data from Bovine leukemia virus (BLV) Tax-transfected HeLa cells

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