Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Methane sources and sinks in the ETNP OMZ

ABSTRACT: Origin and fate of methane in the Eastern Tropical North Pacific oxygen minimum zone.

PROVIDER: PRJEB13513 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

ETNP_OMZ_ParticulateOrganicMatter

Project description:Particulate Organic Matter from filter samples (0.2um Supor, 3um Supor, 52 Nitex) in the oxygen deficient zone of the Eastern tropical Northern Pacific.

2023-06-21 | MSV000092225 | MassIVE

marine metagenome

Project description:Ecological Genomics of the Eastern Tropical South Pacific Oxygen Minimum Zone Metagenome

| PRJNA335767 | ENA

Highly efficient methane biocatalysis revealed in a methanotrophic bacterium

Project description:RNA-Seq profiling of Methylomicrobium alcaliphilum strain 20Z grown in batch on methane. The RNA-Seq work is one part of a systems approach to characterizing metabolism of 20Z during growth on methane. We demonstrate that methane assimilation is coupled with a highly efficient pyrophosphate-mediated glycolytic pathway, which under O2 limitation participates in a novel form of fermentation-based methanotrophy. This surprising discovery suggests a novel mode of methane utilization in oxygen-limited environments, and opens new opportunities for a modular approach towards producing a variety of excreted chemical products using methane as a feedstock.

2013-09-25 | GSE51145 | GEO

Highly efficient methane biocatalysis revealed in a methanotrophic bacterium

2013-09-25 | E-GEOD-51145 | biostudies-arrayexpress

marine metagenome

Project description:Eastern South Pacific Oxygen Minimum Zone Metagenome

| PRJNA244680 | ENA

Arabian sea OMZ

Project description:Metagenomic sequencing of two depths of the Arabian sea oxygen minimum zone using SOLiD and IonTorrent

| PRJEB4261 | ENA

Project description:Eastern Tropical South Pacific Oxygen Deficient Zone metagenomes

| PRJNA704804 | ENA

Project description:Fungal contribution to nitrous oxide production in the eastern tropical North Pacific oxygen minimum zone

| PRJNA623945 | ENA

Project description:Eastern Tropical North Pacific Oxygen Deficient Zone April 2012

| PRJNA1083228 | ENA

The ProteOMZ Expedition: Investigating Life Without Oxygen in the Pacific Ocean

Project description:Untargeted proteomics from a 5,000 km+ transect across the central Pacific Ocean from Hawaii to Tahiti. The expedition crossed multiple biogeochemical provinces, inlcuding the oligotrophic North Pacific Subtropical Gyre, the extremety of the Eastern Tropical North Pacific Oxygen Deficient Zone, and the relatively productive equatorial region associated with upwelling. This dataset focuses on the microbial fraction (0.2-3.0 micrometer filter size) and the microbial community dynamics across these biogeochemical provinces, from the surface oceance to the mesopelagic (1,250 m depth maximum).

2022-08-31 | PXD030684 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data