Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Broiler metagenomics

ABSTRACT: Broiler caecal metagenomics

PROVIDER: PRJEB29210 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2843827_1.fastq.gz	Fastqsanger.gz
	ERR2843827_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

POULTRY GUT METAGENOMICS

Project description:CAECAL METAGENOMICS

| PRJEB34246 | ENA

Microbial metagenomics in broiler meat

Project description:Comparison of microbial communities in marinated and unmainated broiler meat by metagenomics

| PRJEB2763 | ENA

16S rRNA amplicon sequencing of broiler caecal contents

Project description:16S rRNA amplicon sequencing of broiler caecal contents

| PRJEB33036 | ENA

Metagenomics support probiotics as key alternatives to ionophores in broiler production

Project description:Metagenomics support probiotics as key alternatives to ionophores in broiler production

| PRJEB75892 | ENA

F8 broiler by Leghorn and broiler by Fayoumi spleen at day 7 and 8 after challenge with SE

Project description:In the two F8 advanced crosses of broiler by Leghorn and broiler by Fayoumi, birds at day 1 were challenged with Salmonella enteritidis (SE). Spleen were collected at day 7 and 8. SE bacterial load in spleen were measured. Based on the bacterial load, birds were divided into high and low SE load groups. Keywords: Salmonella enteritidis challenge

2006-06-01 | GSE4273 | GEO

Broiler gut culturomics

Project description:Culture-enriched and culture-independent metagenomics of the broiler chicken gut microbiome

| PRJEB121058 | ENA

Mouse caecum vs faeces - Metaproteogenomics Reveals Taxonomic and Functional Changes between Cecal and Fecal Microbiota in Mouse

Project description:We compared the microbiota of paired mouse caecal contents and faeces by applying a multi-omic approach, including 16S rDNA sequencing, shotgun metagenomics, and shotgun metaproteomics. The aim of the study was to verify whether faecal samples are a reliable proxy for the mouse colonic luminal microbiota, as well as to identify changes in taxonomy and functional activity between caecal and faecal microbial communities, which have to be carefully considered when using stool as sample for mouse gut microbiota investigations.

2017-03-31 | PXD004911 | Pride

Chicken Metagenome

Project description:Broiler Caecal Metagenome

| PRJEB29033 | ENA

Escherichia coli strain:broiler | isolate:broiler

Project description:Escherichia coli strain:broiler | isolate:broiler Genome sequencing

| PRJNA685037 | ENA

Integrative multi-omics analysis of dietary fibre-induced modulations in the composition and function of chicken caecal microbiota

Project description:We collected caecal contents from 30 chickens divided into 5 groups (6 birds per group) with each group receiving different quantity of soluble inulin and insoluble cellulose. We isolated DNA, RNA, and proteins to perform metagenomics, metatranscriptomics, and metaproteomics analysis, respectively.

2025-09-17 | PXD068444 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data