Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The effect of γ-butyrolactone (MB3) treatment on the chromatin landscape after wounding of Arabidopsis thaliana roots

ABSTRACT: The effect of γ-butyrolactone (MB3) treatment on the chromatin landscape after wounding of Arabidopsis thaliana roots

PROVIDER: PRJEB34088 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3489120.fastq.gz	Fastqsanger.gz
	ERR3489130.fastq.gz	Fastqsanger.gz
	ERR3489140.fastq.gz	Fastqsanger.gz
	ERR3489150.fastq.gz	Fastqsanger.gz
	ERR3489160.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

The effect of γ-butyrolactone (MB3) treatment on the chromatin landscape after wounding of Arabidopsis thaliana roots

Project description:In a previous study, we found that wound-induced transcriptional expression is strongly correlated with an increase of the level of acetylation of the N-tails of histone 3. To investigate if the increase in histone acetylation is a prerequisite for the induction of wound-induced gene expression, we performed in another experiment the transcriptional profiling of wounded roots with and without treatment with γ-butyrolactone (MB3), a chemical inhibitor of GNAT-MYST family of histone acetyltransferase. In this experiment, to test whether the transcriptional changes we observed in presence of MB3 can be correlated with changes in the epigenetic landscape, we assessed by ChIP-sequencing the impact of MB3 on the enrichment levels of histone marks H3K4me3, H3K27me3, H3K27ac and H3K9/14ac, using H3 as a normalization reference.

2019-11-27 | E-MTAB-8265 | biostudies-arrayexpress

The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots

2019-11-29 | E-MTAB-7612 | biostudies-arrayexpress

The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots

Project description:The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots

| PRJEB30899 | ENA

Transcriptional response to wounding of Arabidopsis thaliana roots

Project description:Time course transcriptional profiling after wounding of 7 day old Arabidopsis roots, cut into 0.3 mm pieces. Samples were taken at 0 h, 1 h, 3 h, 6 h and 12 h after wounding.

2019-11-29 | E-MTAB-7609 | biostudies-arrayexpress

Transcriptional response to wounding of Arabidopsis thaliana roots

Project description:Transcriptional response to wounding of Arabidopsis thaliana roots

| PRJEB30870 | ENA

E-MTAB-7612

Project description:The effect of -butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots

2019-04-05 | E-MTAB-7612 | ExpressionAtlas

Atopomonas hussainii strain:MB3

Project description:Atopomonas hussainii strain:MB3 Genome sequencing and assembly

| PRJNA353167 | ENA

Mycoplasmopsis bovis strain:P-MB3

Project description:Mycoplasmopsis bovis strain:P-MB3 Genome sequencing and assembly