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14028s araC RNA-Seq

ABSTRACT: 14028s araC RNA-Seq

PROVIDER: PRJEB4670 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	ERR348243.fastq.gz	Fastqsanger.gz
	ERR348244.fastq.gz	Fastqsanger.gz
	ERR348245.fastq.gz	Fastqsanger.gz
	ERR348246.fastq.gz	Fastqsanger.gz
	ERR348247.fastq.gz	Fastqsanger.gz

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Project description:We used RNA-seq to determine the effects of AraC and arabinose on RNA levels genome-wide in S. enterica. Wild-type or delta araC mutant cells were grown in both the presence and absence of 0.2% L-arabinose. RNA-Seq libraries from two independent biological replicate samples were sequenced for (i) wild-type cells with no treatment, (ii) wild-type cells treated with arabinose, (iii) delta araC cells with no treatment, (iv) delta araC cells treated with arabinose. Comparisons were made between (i) and (ii) [analysis file name: Salmonella RNA-seq processed WT without arabinose vs WT with arabinose.xls], between (i) and (iii) [analysis file name: Salmonella RNA-Seq proessed no arabinose WT vs no arabinose delta araC.xls], and between (ii) and (iv) [analysis file name: Salmonella RNA-Seq processed arabinose WT vs arabinose delta araC.xls]. All analysis files are available from https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-1901/E-MTAB-1901.additional.1.zip

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