Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

H3K4me1 ChIP-Seq experiment using cells from stage 15 Drosophila melanogaster embryos sorted by reporter gene activity

ABSTRACT: H3K4me1 ChIP-Seq experiment using cells from stage 15 Drosophila melanogaster embryos sorted by reporter gene activity

PROVIDER: PRJEB57626 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10493638.fastq.gz	Fastqsanger.gz
	ERR10493639.fastq.gz	Fastqsanger.gz
	ERR10493640.fastq.gz	Fastqsanger.gz
	ERR10493641.fastq.gz	Fastqsanger.gz
	ERR10493642.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

H3K4me1 ChIP-Seq experiment using cells from stage 15 Drosophila melanogaster embryos sorted by reporter gene activity

Project description:The aim of this study was to analyze if transcriptionally active svb loci show enrichment for H3K4me1. To capture cells where svb-related ventral enhancers are active, we FACS-sorted nuclei from stage 15 Drosophila melanogaster embryos based on the expression of different reporter genes driven by different svb enhancers. The svb_E10 enhancer drives the expression of GFP, whilst dsRed is driven by the svb_7 enhancer. The sorted nuclei were then used for ChIP with anti-H3K4me1 and anti-H3 (for normalization purposes) antibodies.

2022-12-12 | E-MTAB-12396 | biostudies-arrayexpress

Sequential stage specific reporter line analysis (SSRLA) of 3 BAC transgenic mESC lines

2012-07-12 | GSE37446 | GEO

Sequential stage specific reporter line analysis (SSRLA) of 3 BAC transgenic mESC lines

Project description:FACS purified cells from differentiation day 14-15 cells from 3 BAC transgenic mESC lines: Hes::GFP (early), Nurr1::GFP (mid), and Pitx3::YFP (late) DA neuron development reporter lines All three lines were differentiated towards the midbrain dopamine phenotype, and FACS purification was performed at D14-15, and then subject to global transcriptome analysis

2012-07-11 | E-GEOD-37446 | biostudies-arrayexpress

ChIP-seq for EP300 and H3K4me1 in the mouse melanocyte cell line melan-a

Project description:Using ChIP-seq for p300 and H3K4me1, we identified 2,489 putative melanocyte enhancer loci in the mouse genome. We demonstrated that these putative enhancers are evolutionarily constrained, enriched for sequence motifs predicted to bind key melanocyte transcription factors, located near genes relevant to melanocyte biology, and capable of driving reporter gene expression with high frequency in cultured melanocytes and in melanocytes of transgenic zebrafish. ChIP-seq for EP300 and H3K4me1 in the mouse melanocyte cell line melan-a.

2012-09-14 | E-GEOD-38498 | biostudies-arrayexpress

Synonymous codon massive reporter library in zebrafish embryos

Project description:Synonymous codon massive reporter library in zebrafish embryos

| PRJNA856272 | ENA

Targeted PCR amplification and sequencing of reporter constructs from stage 6 drosophila embryos

Project description:Targeted PCR amplification and sequencing of reporter constructs from stage 6 drosophila embryos

| PRJEB79962 | ENA

ChIP-sequencing in stage 10.5 Xenopus laevis embryos

Project description:Epigenomic profiling (H3K4me1, H3K4me3, H3K36me3, p300 and RNA Polymerase II) of Xenopus laevis stage 10.5 embryos.

2016-10-28 | GSE76059 | GEO