Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ChIP-nexus analysis of fission yeast transcription factors Cbf11, Cbf11DBM, Cbf12, Cbf12DBM, Mga2 and Fkh2

ABSTRACT: ChIP-nexus analysis of fission yeast transcription factors Cbf11, Cbf11DBM, Cbf12, Cbf12DBM, Mga2 and Fkh2

PROVIDER: PRJEB65092 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR11834010.fastq.gz	Fastqsanger.gz
	ERR11834011.fastq.gz	Fastqsanger.gz
	ERR11834012.fastq.gz	Fastqsanger.gz
	ERR11834013.fastq.gz	Fastqsanger.gz
	ERR11834014.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 50

Similar Datasets

ChIP-nexus analysis of fission yeast transcription factors Cbf11, Cbf11DBM, Cbf12, Cbf12DBM, Mga2 and Fkh2

Project description:Genome-wide identification of transcription factor (TF) binding sites in the genome of the fission yeast Schizosaccharomyces pombe. The ChIP-nexus method was used. TFs included were: Cbf11-TAP and Cbf12-TAP (and their DBM mutants with impaired DNA binding), TAP-Mga2, and Fkh2-TAP (as an irrelevant control TF). IPs from an untagged WT strain were also analyzed. Cbf11-related IPs were performed from exponential cultures, while Cbf12-related IPs were performed from stationary cultures. YES complex medium was used for all cultivations.

2024-04-05 | E-MTAB-13258 | biostudies-arrayexpress

Large-scale interactome screen for predicted transcription factors in fission yeast using IP-MS.

Project description:Large-scale interactome screen for 89 transcription factors (TFs) in fission yeast. TFs are tagged at the endogenous locus with a 3xFLAG affinity epitope. Cells cultured under optimal conditions (30°C, rich medium) were subjected to IP-MS at 150 mM an 500 mM NaCl.

2024-08-30 | PXD054070 | Pride

Identification of factors that associate with the Dri1-Rhs1 complex in fission yeast.

Project description:LC-MS analyses of fission yeast proteins co-purified with the Dri1-Rhs1 complex.

2025-11-13 | PXD069223 | JPOST Repository

The fission yeast Schizosaccharomyces pombe

Project description:The fission yeast Schizosaccharomyces pombe

| PRJNA413028 | ENA

Factors governing the transcriptome changes and chronological lifespan of fission yeast during phosphate starvation I

Project description:RNA-seq analysis compares gene expression of the fission yeast (Schizossacharomyces pombe) ecl123∆ mutant at various times after phosphate starvation (4, 8, 12, 24, 36 and 48h) to the ecl123∆ mutant fission yeast strain grown in phosphate replete conditions (0h, prior to phosphate starvation).

2024-01-27 | GSE247922 | GEO

Factors governing the transcriptome changes and chronological lifespan of fission yeast during phosphate starvation

Project description:This RNA-Seq analysis compares gene expression of the pho7∆ fission yeast (Schizosaccharomyces pombe) strain prior to phosphate starvation (0 HR), i.e. in phosphate replete conditions, and at various times after phosphate starvation (4, 8, 12, 24, 36, and 48 HR) contrasting to the WT fission yeast S. pombe cells grown in phosphate replete conditions (WT 0HR)

2024-01-27 | GSE247799 | GEO

Factors governing the transcriptome changes and chronological lifespan of fission yeast during phosphate starvation II

Project description:This RNA-Seq analysis compares gene expression of the wild-type fission yeast (Schizosaccharomyces pombe) strain at various times after transfer to defined phosphate-replete ePMGT(+PO4) medium (2, 4, 8 HR) contrasting to the WT fission yeast S. pombe cells grown in phosphate-replete YES medium (0HR).

2024-01-27 | GSE247924 | GEO

RNA-seq of temperature sensitive alleles of splicing factors in fission yeast

Project description:RNA-seq of temperature sensitive alleles of splicing factors in fission yeast

| PRJNA677902 | ENA

Transcription profiling of fission yeast cell cycle, cell cycle overexpressions

Project description:Cell cycle regulation in fission yeast using overexpression of transcription factors

2004-04-01 | E-MEXP-63 | biostudies-arrayexpress

Hap2-Ino80 mediated transcription facilitates de novo establishment of CENP-A chromatin

Project description:Analysis of CENP-ACnp1 ChIP-Nexus from fission yeast

2020-01-05 | GSE136305 | GEO