Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome assemblies of Arabidopsis thaliana accessions from the Southwest of France to test whether natural selection acts on the genetics of host response to commensal bacteria

ABSTRACT: Genome assemblies of 26 Arabidopsis thaliana accessions from the Southwest of France with PacBio HiFi reads

PROVIDER: PRJEB80227 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR14161600.fastq.gz	Fastqsanger.gz
	ERR14161701.fastq.gz	Fastqsanger.gz
	ERR14161703.fastq.gz	Fastqsanger.gz
	ERR14161709.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 27

Similar Datasets

Ancient proteins identify various Denisovan remains from Southwest China

Project description:Two parietal and one radius fragmentary hominin bones were identified from a systematical morphological prescreening of ~60,000 mammalian bone fragments and subsequent ZooMS analysis at Bianfu Cave in Yunan, Southwest China. Combined with two hominin teeth discovered during the excavation, all the five hominin specimens were attributed to Denisovans though shotgun palaeoproteomic analyses, SAP assignment and phylogenetic analyses.

2026-07-24 | PXD073112 | Pride

Southwest carbon cycling organisms

Project description:Southwest carbon cycling organisms Metagenomic assembly

| PRJNA925530 | ENA

Quantification and characterisation of commensal wild birds and their interactions with domestic ducks on a free-range farm in southwest France.

Project description: Not available

| S-EPMC9192735 | biostudies-literature

Southwest Indian Ridge Plume and Background metagenome

Project description:Southwest Indian Ridge Plume and Background metagenome Metagenome

| PRJNA527615 | ENA

Chromatin immunoprecipitation analysis of CENH3 in the Arabidopsis thaliana accessions Col-0, Ler-0, Cvi-0 and Tanz-1

Project description:Chromatin immunoprecipitation analysis of CENH3 in the Arabidopsis thaliana accessions Col-0, Ler-0, Cvi-0 and Tanz-1 was performed in order to align reads to PacBio HiFi genome assemblies which contain complete centromere repeat arrays.

2022-08-01 | E-MTAB-11974 | biostudies-arrayexpress

Haplotype-phased assemblies of the two poplar rust fungi species: Melampsora larici-populina and Melampsora allii-populina

Project description:Dikaryotic rust fungi maintain two distinct haploid nuclei for most of their life cycle, making their large, repeat-rich genomes difficult to assemble and phase. Here we present haplotype-phased, near chromosome-scale genome assemblies for the poplar rust pathogens Melampsora larici-populina 98AG31 and Melampsora allii-populina 12AY07, generated using PacBio HiFi sequencing and Hi-C-guided scaffolding. For each species, we resolve 18 chromosomes per haplotype, providing the first chromosome-level representations of poplar rust fungal species. M. larici-populina diploid assembly spans ~203 Mb, while M. allii-populina reaches ~416 Mb, with high completeness and strong collinearity between haplotypes.

2026-06-24 | GSE328168 | GEO

Airborne bacteria in southwest Greenland

Project description:Aeolian dispersal of bacteria in southwest Greenland: their sources, abundance, diversity and physiological states

| PRJEB11167 | ENA

Preregistered test of whether a virtual nose reduces cybersickness.

Project description: Not available

| S-EPMC11522211 | biostudies-literature

Soil bacterial community composition in Hornsund fjord, Southwest Spitsbergen

Project description:Soil bacterial community composition in Hornsund fjord, Southwest Spitsbergen

| PRJEB9513 | ENA

Doctors will test whether Mozart can reduce stress in babies.

Project description: Not available