Ontology highlight
ABSTRACT:
PROVIDER: PRJEB80484 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Urban sewage metagenomic analysis of Latvian Cities
| PRJEB79273 | ENA
Project description:capture-based sequencing of longitudinally collected urban sewage samples from European cities
| PRJEB123261 | ENA
Project description:This study investigated microbial communities from two wastewater treatment plants (WWTPs) for their potential to degrade PET and investigated enzymes likely involved in its degradation. Activated sludge from urban and industrial WWTPs was analyzed using whole metagenome sequencing and metaproteomics to characterize biofilms and their expressed enzymes.
2026-01-27 | PXD060257 | Pride
Project description:Background: The soil environment is responsible for sustaining most terrestrial plant life on earth, yet we know surprisingly little about the important functions carried out by diverse microbial communities in soil. Soil microbes that inhabit the channels of decaying root systems, the detritusphere, are likely to be essential for plant growth and health, as these channels are the preferred locations of new root growth. Understanding the microbial metagenome of the detritusphere and how it responds to agricultural management such as crop rotations and soil tillage will be vital for improving global food production. Methods: The rhizosphere soils of wheat and chickpea growing under + and - decaying root were collected for metagenomics sequencing. A gene catalogue was established by de novo assembling metagenomic sequencing. Genes abundance was compared between bulk soil and rhizosphere soils under different treatments. Conclusions: The study describes the diversity and functional capacity of a high-quality soil microbial metagenome. The results demonstrate the contribution of the microbiome from decaying root in determining the metagenome of developing root systems, which is fundamental to plant growth, since roots preferentially inhabit previous root channels. Modifications in root microbial function through soil management, can ultimately govern plant health, productivity and food security.
2020-03-06 | GSE146427 | GEO