Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: transcriptome of bombyx mori midgut

PROVIDER: PRJNA1001594 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25499135_1.fastq.gz	Fastqsanger.gz
	SRR25499135_2.fastq.gz	Fastqsanger.gz
	SRR25499136_1.fastq.gz	Fastqsanger.gz
	SRR25499136_2.fastq.gz	Fastqsanger.gz
	SRR25499137_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Project description:Midgut transcriptome of Bombyx mori

| PRJNA1184039 | ENA

Project description:Bombyx mori midgut tissue sequencing

| PRJNA541379 | ENA

Dosage compensation in Bombyx mori is achieved by partial repression of both Z chromosomes in males

Project description:We report the ATAC-seq data that reveal chromatin accessibility during Bombyx mori development

2022-02-05 | GSE191164 | GEO

Changes in gene expressions associated with egg diapause in multivoltine silkworm Bombyx mori

Project description:Changes in gene expressions associated with egg diapause in multivoltine silkworm Bombyx mori Agilent one-color experiment, Agilent-Custom : Bombyx mori 4x44k designed by Genotypic Technology Pvt. Ltd. (AMADID: 034793) , Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0444)

2012-09-30 | E-GEOD-35622 | biostudies-arrayexpress

Changes in gene expressions associated with egg diapause in multivoltine silkworm Bombyx mori

Project description:Changes in gene expressions associated with egg diapause in multivoltine silkworm Bombyx mori

2012-09-30 | GSE35622 | GEO

Silkworm scales LC-MS/MS amalysis raw data

Project description:To identify the cuticular proteins in developing wing scales of Bombyx mori, we performed LC-MS/MS analysis of dissoliving developing wing scales from Bombyx mori

2021-04-26 | PXD024341 | Pride

Silkworm scales LC-MS/MS amalysis raw data

Project description:To identify the cuticular proteins in developing wing scales of Bombyx mori, we performed LC-MS/MS analysis of dissoliving developing wing scales from Bombyx mori

2021-04-26 | PXD024365 | Pride

SILKWORM WING SCALES LC-MSMS ANALYSIS RAW DATA

Project description:To identify the cuticular proteins in developing wing scales of Bombyx mori, we performed LC-MS/MS analysis of dissoliving developing wing scales from Bombyx mori

2021-04-26 | PXD024362 | Pride

Unraveling developmental gene regulation in holometabolous insects through comparative transcriptomics and proteomics

Project description:We here provide a comprehensive paired proteome and transcriptome data set including major stages (egg, larva, pupa and adult) across the whole developmental life cycle of the silkworm Bombyx mori. Our data constitutes a rich resource enabling comparative analysis of developmental regulatory dynamics. Analyzing this paired proteome and transcriptome data we revealed similarities and differences between both levels of gene expression in B. mori. We were also able to examine protein-transcript correlations and characterize stage-specific dynamics. Integrating similar publicly available data for D. melanogaster were also compared the two holometabolous insects at the level of the developmental proteome and transcriptome.

2025-06-06 | PXD051369 | Pride

Genome wide microarray based expression profiles associated with BmNPV resistantance and susceptibility in Indian silkworm races of Bombyx mori

Project description:The molecular mechanism involved in BmNPV resistance was investigated using a genome wide microarray in the midgut tissues of BmNPV infected resistant (Sarupat) and susceptible (CSR-2) Indian silkworm races. In the resistant race, 735 genes were upregulated and 589 genes were down regulated at 12 hours of BmNPV post infection. Similarly in case of susceptible race, 2183 genes were up regulated and 2115 genes were down regulated. Among the differentially expressed genes, nine upregulated and eight down regulated genes were validated using real time qPCR analysis. In Sarupat, the significantly upregulated genes are vacuolar protein sorting associated gene, X fin like protein and Carboxy peptidase E like protein in BmNPV infected midguts, whereas the prominent down regulated genes are glutamate receptor ionotropic kainite 2-like, BTB/POZ domain and transferrin. In the case of CSR-2, the considerably upregulated genes are Peptidoglycan recognition protein S6 precursor and rapamycin while the conspicuous down regulated genes are facilitated trehalose transporter and zinc transporter ZIP1-like gene. Our results provided a vital insights of Bombyx mori in reference with its molecular mechanism in immune response against the BmNPV invasion. Organism : Bombyx mori , Agilent Custom Silkworm Gene Expression 4x44k Array (AMADID: 066047) designed by Genotypic Technology Private Limited.

2016-07-01 | E-GEOD-71240 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data