Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptomes of single and double petals of Rhododendron agastum

PROVIDER: PRJNA1016934 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26057322_1.fastq.gz	Fastqsanger.gz
	SRR26057322_2.fastq.gz	Fastqsanger.gz
	SRR26057323_1.fastq.gz	Fastqsanger.gz
	SRR26057323_2.fastq.gz	Fastqsanger.gz
	SRR26057324_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Project description:Transcriptomes of WT and Red Dot petals of Rhododendron decorum

| PRJNA1018084 | ENA

Physiological and transcriptome analysis provide new insights into the mechanism of enhanced tolerance to high temperature in Rhododendron by melatonin

Project description:Rhododendron is well known woody plant, as having high ornamental and economic values. Heat stress is one of the important environmental stresses that effects Rhododendron growth. Recently, melatonin was reported to alleviate abiotic stress in plants. However, the role of melatonin in Rhododendron is still unknown. In the present study, the effect of melatonin on Rhododendron under heat stress and the potential mechanism was investigated. Through morphological characterization and chlorophyll a fluorescence analysis, 200µM was selected for the best melatonin concentration to mitigate heat stress in Rhododendron. To reveal the mechanism of melatonin priming alleviating the heat stress, the photosynthesis indexes, Rubisco activity and ATP content were detected in 25 ℃, 35 ℃ and 40 ℃. The results showed that melatonin improves electron transport rate (ETR), PSII and PSI activity, Rubisco activity and ATP content under high temperature stress. Furthermore, transcriptome analysis showed that a significant enrichment of differentially expressed genes in the photosynthesis pathway, and most of genes in photosynthesis pathway displayed a more significantly slight down-regulation under high temperature stress in melatonin-treatment plants, compared with melatonin-free plants. We identified PGR5……Together, these results demonstrate that melatonin could promote the photosynthetic electron transport, improve the enzymes activities in Calvin cycle and the production of ATP, and thereby increase photosynthetic efficiency and CO2 assimilation capacity under heat stress, through regulating the expression of some key genes, such as PGR5…Therefore, melatonin application displayed great potential to cope with the heat stress in Rhododendron.

2024-09-30 | GSE214428 | GEO

The Msi1-mTOR pathway drives the pathogenesis of Paget's disease

Project description:We report the single cell transcriptomes of normal and Extramammary Paget Disease (EMPD) human scrotal skin epidermal cells; as well as the single cell transcriptomes of normal and Krt14-rtTA;TRE-Msi1 double transgenic (DTG) mouse dorsal skin epidermal cells.

2020-11-12 | GSE140956 | GEO

Project description:Transcriptomes of dahlia (Dahlia variabilis) floret petals during senescence

| PRJNA742864 | ENA

E-GEOD-34654

Project description:Transcription profiling by high throughput sequencing of Arabidopsis fry1 and xrn single and double mutants

2016-05-06 | E-GEOD-34654 | ExpressionAtlas

E-GEOD-23210

Project description:Transcription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants

2014-07-03 | E-GEOD-23210 | ExpressionAtlas

Transcriptome analysis in petals and leaves of chrysanthemums with different chlorophyll levels

Project description:To identify the regulatory steps that control chlorophyll accumulation, we compared gene expression in petals and leaves of chrysanthemum cultivars with different chlorophyll levels. Microarray analyses showed that the expression levels of chlorophyll biosynthesis genes encoding glutamyl-tRNA reductase, Mg-protoporphyrin IX chelatase, Mg-protoporphyrin IX monomethylester cyclase, and protochlorophyllorophyllide oxidoreductase were well associated with chlorophyll content: their expression levels were lower in white petals than in green petals, and were highest in leaves. Among chlorophyll catabolic genes, expression of STAY-GREEN, encoding Mg-dechelatase, which is a key enzyme controlling chlorophyll degradation, was considerably higher in white and green petals than in leaves. We searched for transcription factor genes whose expression was well related to chlorophyll level in petals and leaves and found several such genes.

2017-08-19 | GSE102752 | GEO

Transcriptome of Dmrt3 KO, Dmrt5 KO, Dmrt3;Dmrt5 double KO and wildtype cortical tissue at E12.5.

Project description:Here we generated transcriptomes of dissected cortical tissue of Dmrt3 and Dmrt5 single knockout, of Dmrt3;Dmrt5 double knock-out and wildtype littermate at embryonic day 12.5.

2018-12-28 | GSE108611 | GEO

E-TABM-448

Project description:Transcription profiling by array of yeast Mig1, Mig2 and Mig3 single, double and triple knock outs

2014-09-02 | E-TABM-448 | ExpressionAtlas

Transcriptome of Arabidopsis bam1 and bam2 mutants for study of early anther development

Project description:Genome-wide transcriptomes of the bam1, bam2 single and bam1 bam2 double mutants were sequenced and analyzed to uncover locus-associated gene expression variations, providing support for different fates of the duplicated BAM1 and BAM2 genes, including sub-/neofunctionalization after duplication.

2015-03-13 | E-MTAB-4435 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data