Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Single-cell RNAseq on Klebsiella infected mouse lung

ABSTRACT: single-cell RNAseq on Klebsiella infected mouse lung

PROVIDER: PRJNA1061585 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27442600.fastq.gz	Fastqsanger.gz
	SRR27442601.fastq.gz	Fastqsanger.gz
	SRR27442602.fastq.gz	Fastqsanger.gz
	SRR27442603.fastq.gz	Fastqsanger.gz
	SRR27442604.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

single-cell RNAseq on Klebsiella infected mouse lung

Project description:Lung cells have traditionally been considered homogeneous. Utilizing single-cell RNA sequencing (scRNA-seq), we analyzed the diverse responses of lung cells to Klebsiella infection. Furthermore, we compared the differential gene expression between wild-type mice and STAT1-knockout mice.

2024-01-10 | GSE252663 | GEO

RNAseq analysis of mouse lung transcriptome from allergic and non-allergic mice prior to and following lung Klebsiella pneumoniae infection

Project description:We have demonstrated that allergic airway inflammation (induced by an ovalbumin sensitization and aerosol challenge protocol) decreases lung bacterial burden following lung infection with Klebsiella pneumoniae. The goals of this study are to indentify novel targets that are expressed during allergic airway inflammation in this model that contribute to enhanced lung bacterial immunity.

2014-07-14 | GSE57602 | GEO

10x single-cell RNAseq profiling of influenza Virus infected Human Lung Tissue Explants (HLTE)

Project description:10x single-cell RNAseq profiling of influenza Virus infected Human Lung Tissue Explants (HLTE)

| PRJNA1117768 | ENA

Single cell RNAseq of lung transplant recipient

Project description:Single cell RNAseq of lung transplant recipient

| PRJNA674516 | ENA

Single-cell RNAseq of the mouse lung

Project description:Single-cell RNAseq of the mouse lung

| PRJNA630656 | ENA

Single-cell RNAseq of PBMC from mice infected with Dengue virus

Project description:Single-cell RNAseq of PBMC from mice infected with either WT DENV2 or a T209 mutant DENV2

2026-04-21 | E-MTAB-15296 | biostudies-arrayexpress

bulk RNAseq of SARS-COV2 infected human lung organoid

Project description:bulk RNAseq of SARS-COV2 infected human lung organoid

| PRJNA673197 | ENA

10x single-cell RNAseq profiling of influenza Virus infected Human Lung Tissue Explants (HLTE)

Project description:This study investigates the interactions between Influenza A virus (IAV) and lung tissue at the single-cell level using the 10x Genomics single-cell RNA sequencing (scRNAseq) platform. Lung tissue samples from a donor with COPD were infected with IAV, and both infected and uninfected samples were analyzed 24 hours post-infection. Single-cell suspensions from multiple infected and uninfected tissue pieces were pooled and analyzed to identify cell types and their responses. A total of 10 cell types were identified, including various airway epithelial cells and immune cells. Apoptotic T cells, characterized by high mitochondrial DNA content, were excluded from gene expression analyses. The presence of viral mRNA was used to indicate viral transcription activity, although distinguishing between intracellular synthesis and extracellular uptake of viral mRNA remains challenging.

2024-05-29 | GSE268542 | GEO

Single-cell RNAseq of the mouse lung

Project description:To define the hedgehog-interacting protein (Hhip) expression domain in adult mouse lung, we conduct single-cell RNAseq of the mouse lung using 10X scRNAseq technique.

2023-04-01 | GSE149939 | GEO