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Chromatin loops are an ancestral hallmark of the animal regulatory genome [ATAC-seq]

ABSTRACT: Chromatin loops are an ancestral hallmark of the animal regulatory genome [ATAC-seq]

PROVIDER: PRJNA1082249 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR28163990_1.fastq.gz	Fastqsanger.gz
	SRR28163990_2.fastq.gz	Fastqsanger.gz
	SRR28163991_1.fastq.gz	Fastqsanger.gz
	SRR28163991_2.fastq.gz	Fastqsanger.gz
	SRR28163992_1.fastq.gz	Fastqsanger.gz

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Project description:We characterised the genome organization in non-bilaterian animals (sponge Ephydatia muelleri, ctenophores Mnemiopsis leidyi and Hormiphora californensis, placozoans Trichoplax adhaerens and Cladtertia collaboinventa, and cnidarian Nematostella vectensis) and close unicellular relatives (ichthyosporeans Sphaeroforma arctica, filasterean Capsaspora owczarzaki and choanoflagellate Salpingoeca rosetta) by combining high-resolution chromosome conformation capture (Micro-C) with profiling of chromatin marks (ChIP-seq), accessible genomic regions (ATAC-seq) and gene expression (MARS-seq).

2025-03-11 | GSE260568 | GEO