ABSTRACT: Transcriptomic analysis reveals the immunomodulatory role of Clostridium autoethanogenum protein on Litopenaeus vannamei under variable salinity conditions
Project description:In order to gain a better understanding of the impact of Vibrio parahaemolyticus infection on genetic regulation of Litopenaeus vannamei,we performed a transcriptome analysis in the hepatopancreas of Litopenaeus vannamei challenged with Vibrio parahaemolyticus, using the Illumina HiSeq 2500 platform.
2020-06-18 | GSE107697 | GEO
Project description:Effects of salinity stress on intestinal microbiota responses of Litopenaeus vannamei to dietary Clostridium autoethanogenum protein
Project description:In order to gain a better understanding of the impact of Vibrio parahaemolyticus infection on genetic regulation of Litopenaeus vannamei,we performed a miRNA-seq analysis in the hepatopancreas of Litopenaeus vannamei challenged with Vibrio parahaemolyticus, using the Illumina HiSeq 2500 platform.
Project description:RNA from different tissues of Litopenaeus vannamei was used to test the ability of the microarray to discriminate tissue-specific gene expression profiles Keywords: validation, tissue comparison
2006-06-01 | GSE4949 | GEO
Project description:Effect of stocking density on the ability of Litopenaeus vannamei to utilize Clostridium autoethanogenum protein
Project description:RNA from different tissues of Litopenaeus vannamei was used to test the ability of the microarray to discriminate tissue-specific gene expression profiles Keywords: validation, tissue comparison RNA from circulating hemocytes, gills, hepatopancreas, or muscle (3 biological replicates each) was hybridized to the L. vannamei microarray. The number of hybridizing genes was noted and the relationships among the global profiles in each sample were determined by cluster analysis
Project description:We provided a step forward in examining the transcriptomic response of L. vannamei to different salinity conditions following the application of the next-generation sequencing techniques and was first to explain osmoregulation of L. vannamei at a transcriptome-wide scale based on three practical cultivated models with different salinities. The assembled sequence data comprising 349,012 unique transcripts were obtained, and the established transcriptional database provided a comprehensive sequence source for this non-model organism.
2019-11-20 | GSE64596 | GEO
Project description:Raw intestinal microbial diversity data on the effect of fishmeal in Clostridium autoethanogenum protein replacement diets on Litopenaeus vannamei
| PRJNA947963 | ENA
Project description:Effects of resveratrol supplementation in high-level Clostridium autoethanogenum protein replacing fishmeal diets on transcriptomic response of Litopenaeus vannamei
