Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: An organ-specific transcriptome atlas of Curcuma wenyujin

PROVIDER: PRJNA1161445 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30688741.fastq.gz	Fastqsanger.gz
	SRR30688742_1.fastq.gz	Fastqsanger.gz
	SRR30688742_2.fastq.gz	Fastqsanger.gz
	SRR30688743_1.fastq.gz	Fastqsanger.gz
	SRR30688743_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Curcuma wenyujin cultivar:Curcuma wenyujin

Project description:Curcuma wenyujin cultivar:Curcuma wenyujin Raw sequence reads

| PRJNA598542 | ENA

Curcuma wenyujin

Project description:Curcuma wenyujin overview

| PRJNA598769 | ENA

Curcuma wenyujin

Project description:Curcuma wenyujin Raw sequence reads

| PRJNA481732 | ENA

Curcuma wenyujin

Project description:Curcuma wenyujin Raw sequence reads

| PRJNA1185965 | ENA

Curcuma wenyujin

Project description:Curcuma wenyujin Genome sequencing and assembly

| PRJNA1133243 | ENA

Project description:Global RNA-sequencing for Curcuma wenyujin root

| PRJNA972258 | ENA

Project description:Research on High Phosphorus Treatment of Curcuma wenyujin

| PRJNA1185031 | ENA

The amniotic fluid transcriptome: a source of novel information about human fetal development

Project description:Amniotic fluid (AF) is a complex biological material that provides a unique window into the developing human. Residual AF supernatant contains cell-free fetal RNA. The objective of this study was to develop an understanding of the AF core transcriptome by identifying the transcripts ubiquitously present in the AF supernatant of euploid midtrimester fetuses. We detected 476 well-annotated genes present in all twelve AF samples. Functional analysis identified 6 physiological systems represented in the AF core transcriptome, including musculoskeletal and nervous system development and function and embryonic/ organismal development. mTOR signaling was identified as a key canonical pathway. Twenty-three highly organ-specific transcripts were identified; six of these are known to be highly expressed by fetal brain. This study demonstrates that AF cell-free fetal RNA can provide biological information about multiple fetal organ systems. This was an in silico investigation of gene expression in 12 euploid midtrimester AF samples acquired primarily for advanced maternal age. We focused on the transcripts called M-bM-^@M-^\presentM-bM-^@M-^] in all of the samples. Functional analyses were performed using Ingenuity software. Fetal-organ specificity was examined for each transcript using the GNF Gene Expression Atlas. For fetal organs not represented in the atlas, manual literature searching and Ingenuity analysis were used.

2012-01-11 | E-GEOD-33168 | biostudies-arrayexpress

A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies

Project description:Whole-genome transcriptional profiles of rice cell types, isolated by laser-capture microdissection. The first comprehensive multi-organ cell type transcriptome atlas from a plant, with 40 distinct cell types from several developmental stages of seeds, shoots and roots, reveals cell-specific promoter motifs, interaction partner candidates, hormone response centers, and other previously unrecognized cellular properties and patterns. Keywords: Cell type comparison

2008-10-16 | GSE13161 | GEO

Curcuma longa cultivar:Narendra Haldi and Rajendra Sonali

Project description:Curcuma longa transcriptome

| PRJNA1099963 | ENA